Rhodoferax ferrireducens: Rfer_2663
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Entry
Rfer_2663 CDS
T00334
Name
(GenBank) putative type-4 fimbrial biogenesis pily1-related signal peptide protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
rfr
Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rfr02044
]
Rfer_2663
02035 Bacterial motility proteins [BR:
rfr02035
]
Rfer_2663
Secretion system [BR:
rfr02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Rfer_2663
Bacterial motility proteins [BR:
rfr02035
]
Pilus system
Pilus assembly proteins
Rfer_2663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
DUF7574
Motif
Other DBs
NCBI-ProteinID:
ABD70379
UniProt:
Q21V24
LinkDB
All DBs
Position
2929644..2933729
Genome browser
AA seq
1361 aa
AA seq
DB search
MNFRILFSSPSSKSSKKKWGVRLALLAAFSAITVGVVISQTITLPPLVVLPAEPLYMNGA
KTKGNLTLALSVEFPTVGQTYRDDFDSTKEYVGYFDPKACYRAVLSSGSLGNYFDWQTNK
GTFSATCPSSQFDGNFMNWATSSAIDIMRYGLTGGNRTIDDSNTTVVDRAWLPDNFYKNS
SYFSEKFVPNAQLSGRTENSPTSFPNGMWIYNCKNRVYFADAQDSGTSCDSPFGVSGAQS
EHLIKANANNKGNFYEVRNLVCDPNSATNRLMTYDPDTKKWTGLCYRYPNGKYKPVGQFQ
MNADNLRVSVLGYLQDDNRSRYGGVLRAPLKYLGPKNYDTNFNLLTAANARSEWDATTGV
FVANPQSGDSTYGDQGFGQSGVINYVNKFGTLNPDSIGEYKTYDPLSELYYEAIRYLQGK
QPTAQAITNVSGSTSSKALQENFPVYKTWTDPFAGFTDTTDTGKGCLRNSILTIADVFTH
SDRSLPGNTLGTSTDDFVRSVETNPALDVPFWTSVVGSFESKTTSTATVTYSDSQGLTQT
AGNLATNKLYDASTSYDLSNAATVSTGAGTGSYYMAGLAYWANTQSFRTDLPKGRIKTYS
IDVNENRASDNVDFRRTRQLYLGAKYGGFDDSATGNTGNPYTGGTNVLWQGTDGEAKNYF
LVSDAKKFLDSLAEVFARVVEETGSIAGGAISTQRLTAGQAEAVFQARFNPVANFWSGRL
IKFPLTLDTAGTGLVIGNTPTWEAGQVLTAATLVDHGAARNIVIGAPIGLQATVLPTPFK
WADLAQAHKDALNISPYGVPAPVVDTLGPDRLNYLRGDRSKEITPSTPLGPFRPRDIVMG
DIVNSGLVYMGKPSGSITGTDYNTFYAANKSRSPVIFANANDGMLHAFYDSTGAEAFAYI
PGFVAGKLNQLPDQDYSHISINDATPAVSEAYIGGQWRSVLVSGVGGGGQGLYALDVTNP
ATFTKDNVLWEFTDRDHVAMGNVLGTPQIVKLRTTNNGVTPVGYKWYAVVASGINNYAAD
GYAHATGNPSIFIIDLSRKPSDYPTEKPWTEGTNFWRIELPQSSTTIAKGLLGLTTVKNF
QTGAVDSLYAGDMQGNVWKLDFTLRGTGSLTTDATTNLTAFNAKTGTSTAFFVAKDSNGA
LQPITGEPVVINAFFDSKLVSFGTGKYLETPDTTVPMTVGASFYTLLDNTQAVTGRSVLQ
QGSVSTTGTVTIPSFVYGKPTTAAPALRMGWYIDFDKSIGERQISDITADFGQLFFGSLF
PTKGSCGEGGGRFYAVNSLTGNGMSELSQVGILAAPLVLEVGSTGLTLSDTSGQRTATRN
VAIITQGSKGLKVAATGLTYKDQVGRLSWRQINNFRENKNN
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgaatttccgaattttgttttcaagcccatccagcaagtcatcgaaaaaaaagtggggc
gtccggctggccctgctggcagccttctcggccatcacggtcggggttgtgatcagtcaa
accatcaccctgccgcccttggtggtgctgccggccgagccgctttacatgaacggcgcc
aagaccaaaggcaacttgacgctggcgctttcggtggaatttccgaccgtagggcagact
tatcgcgacgacttcgattcgaccaaggagtacgtcggctattttgaccccaaagcctgt
tatcgcgctgttttgagcagcggttctctcggcaattatttcgactggcagaccaacaag
ggcactttttcggcgacctgcccaagcagtcagttcgatgggaacttcatgaactgggcc
acctcgtcggccatcgatatcatgcgttacggcctgaccggcggtaaccgcaccattgac
gacagcaacacaacggtggttgaccgcgcttggttgcccgacaacttttacaaaaactcc
agctacttctccgaaaaatttgtaccgaacgcacagttgtctggcaggaccgaaaattcg
cccacgtcgtttcccaacggcatgtggatttacaactgtaaaaatcgcgtgtattttgcc
gacgctcaggacagtggcacaagctgcgacagtcctttcggtgtttccggtgcccaaagc
gagcatctaatcaaggcaaacgccaacaacaagggaaacttctacgaagtcagaaacctg
gtttgcgaccccaacagtgccaccaaccgcctgatgacttatgacccggataccaaaaaa
tggacgggcctgtgctatcgctatccgaacggcaagtacaagccagtgggacaatttcag
atgaatgcagacaacctgagggtctctgttttgggttatcttcaagatgacaatcgatca
cgctacggtggggtgctgcgtgcgccgctcaaatacctggggcccaaaaactatgacacc
aacttcaatttgctgactgcggccaatgcacgcagcgaatgggatgccacaacaggtgtg
tttgtcgccaacccccagagtggtgattcaacctatggcgatcagggctttggtcaaagt
ggggtcatcaactatgtcaacaagttcggcacactcaaccctgacagcatcggcgaatac
aagacatacgatccactcagcgagctgtattacgaggcgattcgttatctgcagggcaag
cagcccacagcccaagccataacaaacgtgagcggttcaacgtcttccaaagcgcttcaa
gaaaattttccggtttacaaaacctggacagacccgttcgcaggcttcactgataccacg
gacaccggcaaaggttgtttgagaaacagcattctgaccatcgcggatgtattcacgcac
agcgaccgctcactcccgggtaacacgctgggcacctcgactgatgactttgtgcgaagt
gtagaaaccaaccccgcactagatgttccgttctggaccagtgtggttggcagcttcgag
agcaaaacgacctctaccgcgactgtgacctacagcgacagccaaggactcacccagact
gcgggcaacctggccaccaacaaactctacgatgccagcacatcttatgatttgagcaac
gccgccaccgtaagtaccggcgctggaactgggtcttactacatggccggcttggcttat
tgggccaatacccagagttttcgtaccgatttacccaaaggacggatcaaaacatattcc
attgatgtgaatgagaaccgagccagcgacaacgtagatttccgccggacgcggcagctg
tacctcggcgccaaatatggtggctttgacgacagcgcgaccggcaacaccggcaaccct
tacacgggcggcaccaacgtgctttggcagggcacagacggagaagccaagaactacttt
ctggtcagcgatgccaagaaatttctggactctctggccgaggtattcgctcgcgtcgtg
gaagaaaccggcagtattgccggcggcgccatttcgactcagcgtcttaccgcaggccag
gcagaggccgtgttccaggcccggtttaatccggttgccaacttctggagtgggcgtctg
atcaaattcccactcacgctggatacggcaggcactggtctggtcatcggcaacaccccc
acttgggaggcgggccaggtcttgaccgctgcaaccctggtcgaccacggcgctgccaga
aacatcgtcattggcgcaccaattggactgcaggctacggtcttgcctaccccgttcaaa
tgggctgatctggcccaggcccacaaggacgccctcaatatcagcccctatggcgtccct
gccccagtcgttgacacgctgggcccggaccggcttaattacctgcgtggcgaccggagc
aaggaaatcacaccctccacaccactgggcccattccgtccgcgtgacatcgttatgggc
gatatcgtcaacagcggcctggtgtacatgggcaagccgtcgggtagcatcacagggacc
gactacaacactttctacgcggccaacaaaagtcgctcacccgttatttttgccaacgcg
aatgacggcatgctgcacgccttttacgacagcactggcgccgaggcattcgcttacatc
cccggattcgttgctggcaaactcaaccaactgcccgatcaggactacagccacatcagc
atcaacgatgcaacacccgcggtatcagaggcttatatcggcggtcagtggcgcagtgtt
ctggtctctggtgttggcggcgggggccagggcctgtatgccctggatgtgaccaatcca
gcaactttcaccaaagacaatgtgctctgggagtttacggaccgcgaccatgtggccatg
ggcaatgtactgggcacaccgcagatcgtcaagcttcgtaccaccaacaatggcgttacc
cccgtcggctacaaatggtatgcggtggtcgccagtggtattaacaactacgcggcagac
ggttacgcgcatgccaccggcaatccttcgatcttcatcatcgacctgtccagaaagccg
agcgattatccgaccgagaagccttggaccgagggcaccaacttctggcgcattgagctt
ccccaaagcagcaccactatcgccaaaggcctacttgggctgaccacggtgaagaacttc
cagactggcgcggttgatagtctgtatgctggggatatgcagggcaacgtctggaagctt
gacttcacgctgcggggcaccggcagcttgactaccgacgctaccaccaacttgacggca
ttcaacgccaaaaccggaaccagcactgcatttttcgtcgccaaagacagcaacggggca
ctgcagcccatcaccggcgagcccgttgtcatcaacgcttttttcgacagcaagctggtg
tcctttggtaccgggaaatacctggagacaccggacaccaccgtgccgatgaccgtgggc
gcttcgttttatacgctgctagacaacacgcaagccgttaccggacgctcggtcttgcag
caaggcagcgtttcgaccactggcactgtcacgatcccaagttttgtctatggaaagccc
accacagccgcccccgcattgagaatgggttggtatatagattttgacaagagcattggc
gagcgccagatcagcgatataaccgccgattttggtcagctgttttttggttcccttttc
cccacaaagggctcatgcggcgagggcgggggtcggttctatgctgtgaactcactcacg
ggtaacgggatgtccgagttgtcgcaggttggcatattggccgcacccctggttttggaa
gtcggcagcacggggcttaccttgagtgacaccagtggtcagcgaacagcaacccgcaac
gtggctatcatcacacagggatccaagggtcttaaggttgctgccactggactcacctac
aaggaccaggtaggacgactgagctggcgccagatcaacaacttccgggaaaacaagaat
aactaa
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