Rhodoferax ferrireducens: Rfer_2754
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Entry
Rfer_2754 CDS
T00334
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00071
Fatty acid degradation
rfr00280
Valine, leucine and isoleucine degradation
rfr00310
Lysine degradation
rfr00362
Benzoate degradation
rfr00380
Tryptophan metabolism
rfr00410
beta-Alanine metabolism
rfr00640
Propanoate metabolism
rfr00650
Butanoate metabolism
rfr00907
Pinene, camphor and geraniol degradation
rfr00930
Caprolactam degradation
rfr01100
Metabolic pathways
rfr01110
Biosynthesis of secondary metabolites
rfr01120
Microbial metabolism in diverse environments
rfr01200
Carbon metabolism
rfr01212
Fatty acid metabolism
Module
rfr_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Rfer_2754
00650 Butanoate metabolism
Rfer_2754
09103 Lipid metabolism
00071 Fatty acid degradation
Rfer_2754
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Rfer_2754
00310 Lysine degradation
Rfer_2754
00380 Tryptophan metabolism
Rfer_2754
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Rfer_2754
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Rfer_2754
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Rfer_2754
00930 Caprolactam degradation
Rfer_2754
Enzymes [BR:
rfr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Rfer_2754
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Rfer_2754
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Rfer_2754
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
Arg_decarbox_C
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ABD70466
UniProt:
Q21UT7
LinkDB
All DBs
Position
3040935..3043094
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AA seq
719 aa
AA seq
DB search
MKTIQYELQDGVATITFNEPNSPVNTMCLQWQQDMSALVAQVLKDQDAIKGIILTSAKST
FFAGADLKGAMRLRPSDAGAIFTEIELVKKNFRTLETLGKPVVSCLNGTALGGGWEVALV
GHYRIAVDDRKTQFGLPEVTLGLLPGASGVTKMTRHLGLMGAQPYLVEGKTFSPKEAKSL
GLVHELVAPGDTAATEMRTKALAWIAANPSAQHPWEAKGYKVPGGLPSSPAVAQMLVVAP
AMIKQQTRGLYPAPEAIMACMVEGLQVDIPTALRIESRYLAKLMTGINARAMINTFFFNL
NAIKSGQSRPSQSPRFKPAKVGLLGAGMMGAGIAFAQASKGIATVLKDVSQEKADLGKSY
SARITQARVDKGRMSATDQQTILERIHATDQVADLAGCDLIIEAVFENRELKAKVTQEAE
PMLAPGGFFASNTSTLPISGLAKASAAADKFIGIHFFSPVDKMKLVEIIRGRQTSEDTVA
RAYDYVQAIGKMPIVVNDSRGFFTSRVFGTFVMEGVAMLGEGIPAAAIENAGIQCGMPVG
PLAVLDETSLTLSLHVMEQTRADFEAEGKTYVASPGEALLVNLVKEHQRPGRAGGAGFYE
YPAERGVKKFLWPQLKPLFEKADVQWDITDLKDRLLYRQAVETARCLSENVLTSVHDANI
GSIFGIGFPAWTGGAMQFIYGMGMDAFVTRADALAARFGAGFALTDEVKAAITRYQPVY
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccatccaatacgaattacaagacggcgttgccaccatcacctttaacgaaccc
aattcccccgtcaacaccatgtgcctgcaatggcagcaagacatgtcggccctcgttgcg
caggttctgaaggaccaggacgccatcaaaggcatcatcctgacatcggccaaatccact
ttttttgccggggctgacctgaagggcgcgatgcgcctgcggccgtccgacgcgggcgcc
atcttcaccgagatcgagctggtcaagaagaatttccgcaccctggagaccttgggcaaa
ccggtggtgagctgcctcaacggcacggccttgggcggcggctgggaagtggccctggtc
ggccactaccgcattgccgttgacgatcgcaaaacccagttcggcttgcccgaagtgacg
ctgggcttgttgcctggcgccagtggcgtcaccaagatgacgcgccacctcggtttgatg
ggtgcacaaccctacttggtggaaggcaagactttctcgcccaaggaagcaaaaagtctg
ggactggtgcatgagctggtcgcaccgggcgacacagccgccaccgagatgcgcaccaag
gcactggcctggattgccgccaaccccagcgcccagcacccctgggaagccaaaggctac
aaggtgcccggcggcctgccctccagcccggctgtagcccaaatgctggtggtggctccc
gccatgatcaagcagcaaacgcgcggcctgtacccggcaccggaggccatcatggcgtgc
atggtggaagggctgcaagtcgatatcccgaccgcactgcgcatcgagagccgctacttg
gccaagctcatgaccggcatcaacgcccgcgccatgatcaatacctttttcttcaacctg
aacgccatcaagagcggccagtcgcgaccttctcagtccccgcgcttcaaaccggccaag
gtgggtttgctgggtgccgggatgatgggtgcgggcattgccttcgcccaggccagcaaa
ggcatcgccaccgtgctcaaggatgtgagtcaagaaaaagccgatctgggcaagtcttac
agcgcccggatcacccaggcgcgcgtggacaaaggccgcatgagcgcaaccgaccagcaa
accattcttgagcgcattcacgccaccgaccaagtggcggatctggcgggttgtgacctg
atcatcgaggcggtgtttgaaaaccgggagctcaaggccaaggtcacccaagaagccgag
cccatgctggcgcccggtggcttctttgcgtcgaacacctccacgctgcccatcagcggc
ctggccaaggccagtgcggctgcagacaaatttatcggcattcatttcttcagcccggtg
gacaagatgaagctggtcgaaatcattcgtggccggcaaaccagtgaagacacagtggcg
cgggcttatgactacgtgcaggccatcggcaaaatgcccattgtggtgaacgattcgcgt
ggcttctttaccagccgtgtgtttggcacctttgtcatggaaggcgtggccatgctgggt
gaaggcattccggcggcagccatcgaaaatgcgggcattcagtgtggcatgccggtcgga
ccgctggcggttttggatgaaacctcactgacgctgagtctgcatgtgatggagcaaacc
cgcgccgacttcgaagccgagggcaagacttatgtggccagcccaggcgaggcgctgctg
gtcaacctggtgaaggagcaccagcggcccggccgcgcggggggcgccggcttctacgaa
taccccgctgagagaggcgtcaaaaaattcctctggccgcaactcaaaccgctgtttgaa
aaagccgatgttcagtgggacatcaccgacctgaaagaccgcctgctttatcgtcaggcg
gtggagacggcgcgctgtttgagcgaaaacgtgctcaccagcgtacatgacgccaacatc
ggctccatcttcggcattgggttcccggcctggaccggtggtgccatgcagttcatctat
ggcatggggatggacgcctttgtgacgcgggcagacgcgctggcagcccggttcggggcc
ggttttgcgctgacggacgaagtcaaggcagcaatcacacgctaccagcctgtttattga
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