Rhodoferax ferrireducens: Rfer_2872
Help
Entry
Rfer_2872 CDS
T00334
Name
(GenBank) TRAP dicarboxylate transporter-DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rfer_2872
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfr02000
]
Rfer_2872
Transporters [BR:
rfr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Rfer_2872
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
ABD70583
UniProt:
Q21UH0
LinkDB
All DBs
Position
3171820..3173607
Genome browser
AA seq
595 aa
AA seq
DB search
MQFLVQNIAPIMFAGLIVFLLLGFPVAFSLGACGLFFGFVGIELGLLPEALLQALPLRIF
GIMQNDTLLAIPFFTLMGLILERSGMAEDLLDTIGQLFGTIRGGLAFAVIFVGALLAATT
GVVAASVISMGLISLPIMLRYGYDRRVASGVIAASGTLAQIIPPSLVLIILADQLGRSVG
EMYKGAFIPGFALTGLYFLYIVILTFIRPHWVPALPLEARTIREDNGSSGLRSLLILTII
STVAAVSLGQNYAQVLGWLKGEAVLSVATDETIVVSLCAGVILAFVIALVNKATHLGLLS
RMAERVTFVLIPPLLLIFLVLGTIFLGVATPTEGGAMGAMGALIMAMSRGRLSMKLLKQA
LNSTAKLSSFVVFILIGSTVFSLVFQGVDGSKWVEHLLTSVPGGQVGFLIVVNLLIFFLA
FFLDFFELSFIVVPLLAPVAEKIGIDLIWFGVLLGVNMQTSFMHPPFGFALFFLRSVAPA
TAYTDKLTKKLIQPVTTMQIYWGAIPFVIIQIIMVGLIIAFPGIVSSGLDKKAEYDLDKV
RIEMEATMPDSMEQQDPTAGMPDAAGGAAPADSSDPAADPLKALQDSLNKPEKKN
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttctagtacaaaacatcgcccccatcatgtttgcggggctcatcgtcttcctg
ctgctgggttttccggtagcgttcagcctgggcgcctgcggcctgttctttggctttgtg
ggcatcgagctgggactgctgcccgaagccctgctgcaggccctgcccttgcgcatcttc
ggcatcatgcaaaacgatacgctgctggcgattccattcttcaccttgatgggtttgatc
ctggagcgcagtggcatggccgaggatttgctcgacaccattggccagctgtttgggacg
atacgtggcggcctggcctttgccgtgatctttgttggcgctttgctggcagcgaccacc
ggcgttgtcgctgcctccgtgatttcaatgggtttgatctccttgcccatcatgttgcgc
tatggttatgaccgccgagtcgcctcgggcgtcattgcagcatccggtacgctggcacaa
atcattccgccgtcgctggtgctgatcattctggctgaccagttgggccgcagtgtcggt
gaaatgtacaagggcgcgttcatccccggctttgccctgaccggcctctatttcctttat
atcgtgatcctgaccttcatccgcccgcactgggttcccgctttgccgctcgaggcccgc
acgatccgggaagacaacggcagcagcggtctgcgctcgcttctgatactgaccatcatc
tcgaccgtagcggcagtgtctctgggacaaaactacgcacaggtgttgggctggttgaaa
ggtgaggcggtactgagcgtggccaccgatgaaaccattgtggtgtcgctttgcgccggc
gtcatactggcctttgtcatcgcgctggtcaacaaggcgacccacctgggtctgctctca
cgcatggccgagcgcgtcacctttgtgttgatcccgccgctgctgctcatctttctggtg
ctgggaacgattttcctgggtgtagccacaccaaccgaaggtggcgccatgggcgccatg
ggcgctttgatcatggccatgagccggggccgtttgagcatgaagctgctgaaacaggcc
ttgaattcgaccgccaaactgtcgagttttgtggtgttcatcctgatcggctccaccgtc
ttcagtctggtgttccagggtgtggacggctccaaatgggtggagcacttgttgacatcg
gttcccggcgggcaggtgggcttcctgattgtggtcaatctgctgattttcttcctggca
tttttcctggacttctttgaactctcgtttatcgtcgttcccttgctggcacccgtggcc
gaaaaaataggcatcgacctgatctggttcggcgtgctgctgggcgtcaacatgcagacc
tcgttcatgcacccgccatttggtttcgccctgttcttcttgcgcagcgtggcaccggcc
acggcctataccgacaagctgaccaagaagctgatccagccagtgaccaccatgcaaatt
tactggggtgcaataccgtttgtgattatccagatcatcatggtcggcctgattattgcg
ttccccggcatcgtctcaagcggcctcgacaagaaggcggagtacgacctcgacaaggtc
cggatagaaatggaagcgaccatgccggactcgatggaacagcaagacccgaccgccggc
atgccagacgcagcgggtggcgcagcacctgccgatagcagtgaccccgccgccgacccg
ctcaaggcgctccaagactcactcaacaagccagagaagaaaaactga
DBGET
integrated database retrieval system
