Rhodoferax ferrireducens: Rfer_3077
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Entry
Rfer_3077 CDS
T00334
Name
(GenBank) DNA-cytosine methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00270
Cysteine and methionine metabolism
rfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Rfer_3077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfr03000
]
Rfer_3077
03032 DNA replication proteins [BR:
rfr03032
]
Rfer_3077
03036 Chromosome and associated proteins [BR:
rfr03036
]
Rfer_3077
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
rfr02048
]
Rfer_3077
Enzymes [BR:
rfr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
Rfer_3077
Transcription factors [BR:
rfr03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
Rfer_3077
DNA replication proteins [BR:
rfr03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
Rfer_3077
Chromosome and associated proteins [BR:
rfr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
Rfer_3077
Prokaryotic defense system [BR:
rfr02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
Rfer_3077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
TAF1C_HB
Motif
Other DBs
NCBI-ProteinID:
ABD70787
UniProt:
Q21TW6
LinkDB
All DBs
Position
complement(3405240..3406793)
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AA seq
517 aa
AA seq
DB search
MLQRGEIPVIDLFAGPGGLCEGFSSIFDETGARRFAVKVSIEKDPVAHRTLLLRAIFRKF
AKGKVPDCYYEYLRGNITREQFFAHPDIKDAAEHAAKEAKCAELGLTPHAEIDSWISEAL
GDKTDWVLIGGPPCQAYSLAGRSRLSGMKREEFESDKRHFLYTEYLRIIQQFEPSVFVME
NVKGMLNSTHGGSRIFDRILADLKAPKEGLSYEIRSLVVGGDELEPKDYVIQAENYGIPQ
NRHRVILFGIRSDVAESTTALKTSPRQFLLRKSFPQVGVDEALAGLPAIRSRLSKEDDSH
KKWLSALRKAPTTLLTWHMPVREKIEVLMKSAAKKAKNHESAGEKFTAMKVEPGEKMPQP
LRAWLLDERVGGVVQHESRSHMRSDLHRYMFASCFLKSEKYAPTLRNFPPRLLPAHLNVD
AETVPFVDRFRVQVGNAPSSTVVAHIKKDGHYYIHPDSSQCRSLTVREAARLQTFPDNYF
FEGNRTEQYGQIGNAVPPLLAKKIAKVIYKFLSSPRE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagcgcggtgagattccggtgatcgacttgttcgccggtccgggggggctttgc
gaaggtttttcgtcaatttttgacgaaaccggcgcgcgccgcttcgccgtcaaggtgtcg
attgaaaaggaccccgtggctcatcgaaccttgctgctgcgggcgatttttcggaagttt
gcaaagggcaaggttccagactgctattacgagtatctgcgcgggaacattacccgcgag
cagtttttcgcgcatccggacatcaaagatgcggctgaacacgccgcgaaggaagccaag
tgcgcggagcttggacttaccccgcacgcggaaatcgactcttggatcagcgaggcgctc
ggcgacaaaaccgattgggttctaattggtggcccgccatgtcaagcgtattcattggcc
ggacgttcgcggctaagcggaatgaagcgcgaagagttcgagagcgacaaacggcacttt
ctctacacggaatacctgcgcatcatccagcagtttgaaccgtcggttttcgtcatggaa
aatgtcaaggggatgctcaactcaacccacggtggatcgcgcatattcgatcgcatcctc
gccgatctcaaagcgcccaaagagggcctcagctatgagattcgttcgttggtcgttggc
ggggacgagctcgaacccaaagactatgttattcaggccgaaaactatggcattccgcaa
aaccgccaccgagtgattcttttcggaatcaggtccgatgtggcggagtcgaccacggcg
ttgaaaaccagtccacgtcaatttttgttgaggaagtcctttccgcaggttggcgttgat
gaggctttggctggattgcctgcgattcgaagccgcctgtcaaaggaagatgattcgcat
aaaaagtggctttcggccttgcgcaaggcgccgaccacgcttttgacatggcatatgcca
gtgagggaaaaaattgaagtcctgatgaagagcgcggcgaagaaggctaaaaaccacgag
tccgctggggaaaagttcactgccatgaaggtggagccaggtgaaaagatgcctcaaccg
ttaagggcatggttgctggatgagcgtgtggggggggtagttcagcatgagagcagaagc
catatgcgatctgacttgcatcgctacatgtttgcgtcttgttttttaaagtctgaaaaa
tatgcgccaactcttcgcaattttccacctaggcttttgcctgcccacttaaacgtcgat
gccgaaacggttcccttcgtggatcgttttcgtgtgcaggtgggtaacgccccgtcctcc
acggtggtcgcacacatcaagaaggatgggcattactacatccatccggactcatcgcag
tgcaggagtctgacggtccgcgaagccgcgcgattgcagacttttcccgacaattatttc
ttcgaggggaatcgcacggagcaatatggccaaattggcaatgcggttccgccattactg
gcaaagaaaattgccaaggtgatttacaagtttttgtcgtcgccgcgcgagtga
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