Rhodoferax ferrireducens: Rfer_3230
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Entry
Rfer_3230 CDS
T00334
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr02010
ABC transporters
rfr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Rfer_3230
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rfer_3230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfr02000
]
Rfer_3230
Transporters [BR:
rfr02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Rfer_3230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
ABD70939
UniProt:
Q21TG4
LinkDB
All DBs
Position
complement(3578039..3579241)
Genome browser
AA seq
400 aa
AA seq
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MNKQWHKKWMGLMVLSGALGSALAQPANPLRIGLIGPLTGPSADFGVPMMNGAKLALDEI
NAAGGYLGRPLELVIKDDAGTPDVGLQRSREFLKDQLIATIGFCNTGVALKSLEVFQSAK
IPLIVPCATGTPITTTYPAPDSYVFRTSARDAIQAPFVVDDIVARGWTRVAVFADNTGYG
EAGLQDVLKALAAKNLKPVHVARFELGVKDLQTELKAAQAAGADVIFSYTVGQENAVIAR
GRQALGWKVPQVGAWPLSFPFFIDGAREAAEGALMAQTFIAEPSNERRSAFLSAYARKYK
TTKITVPMAAVQAYDSVYLLTYAILAIRNGDLSGPSVKAALETMPRIYYGVAATHEHPFS
KDDKDAISINMLVMGMVKNGAVTFAYPQDRTRNLIVKRKR
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaatggcacaaaaaatggatgggcctcatggtcttgtctggcgctctgggc
agcgcgctggcccagccggccaatcccctgcgcatcggcttgattggcccgctcaccggg
ccttcggcggattttggcgtgcccatgatgaatggcgccaagctggcattggatgaaatc
aatgccgccggtggttacctggggcggccgctggagctggtgatcaaggatgacgccggc
acgccagatgtcggcttgcagcgatccagagagttccttaaggatcagttgatcgccacc
atcggcttttgcaatacgggcgtggccctgaagtcgctggaggtgttccagagcgccaag
atacccttgatcgtgccctgcgccaccgggacccccatcaccaccacatatccggcaccc
gacagctatgttttcaggacgtcggcgcgcgacgccattcaggcaccgttcgtggtcgac
gatatcgtcgcacgtggctggacccgggtggcggtgtttgccgacaacaccggctatggc
gaggcgggcttgcaggacgtgctgaaggcgctggcggccaagaatctcaagccggtgcat
gtggcccggtttgagctcggcgtgaaagacctgcaaaccgaactcaaggcggcgcaggcg
gccggtgccgatgtgattttcagctacacggtcgggcaagagaatgccgtgattgcccgc
gggcgccaagccctgggctggaaggtgccccaagtcggggcctggcccttgtcgtttcca
tttttcatcgacggcgcaagggaagccgccgaaggggcgctgatggcgcagacctttatt
gccgagccgagcaacgagcggcgcagtgcgtttctcagcgcttacgcgcgtaaatacaag
acgaccaagatcacggtgccgatggcggcggtgcaagcctatgactcggtctatctgctc
acctacgctattttggcgatccgcaatggcgacctctcgggcccctcggtcaaagccgcg
ctggagaccatgccgcgcatctactacggtgttgccgccacccacgagcatccgttcagc
aaggatgacaaggacgccatcagtatcaatatgctggtgatgggcatggtgaaaaacggc
gctgtgaccttcgcctatccgcaggaccggacccgcaacctgattgtgaagcgcaagcgt
tga
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