Rhodoferax ferrireducens: Rfer_3275
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Entry
Rfer_3275 CDS
T00334
Name
(GenBank) methionyl-tRNA synthetase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00450
Selenocompound metabolism
rfr00970
Aminoacyl-tRNA biosynthesis
rfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Rfer_3275
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Rfer_3275
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rfr01007
]
Rfer_3275
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rfr03016
]
Rfer_3275
Enzymes [BR:
rfr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
Rfer_3275
Amino acid related enzymes [BR:
rfr01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Rfer_3275
Transfer RNA biogenesis [BR:
rfr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Rfer_3275
Prokaryotic type
Other AARSs
Rfer_3275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
tRNA-synt_1
tRNA-synt_1f
tRNA-synt_1e
Anticodon_1
Anticodon_3
Motif
Other DBs
NCBI-ProteinID:
ABD70984
UniProt:
Q21TB9
LinkDB
All DBs
Position
3634355..3636457
Genome browser
AA seq
700 aa
AA seq
DB search
MPRQLFVTTALPYANGNFHIGHIMEYIQADIWVRYQRMMGNAVHFVCADDCHGAPIMIAA
EKVGKTPQQFVADIASGRKPYLDGFHIGFDNWHSTDGAENHELAQAIYRDLKAAGLISTR
VIAQFFDTEKNMFLPDRFIKGECPKCGAKDQYGDNCEECGAVYSPTELKNPYSALSGVTP
VLRDSEHYFFKLSDPRCVEFLEQWTTDTNPRGQSRLQAEVYNKIKEWLLPDAEGKRDLGD
WDISRDAPYFGIEIPDAPGKYFYVWLDAPIGYLAALKNRFIKLAGDATTGAQHYDDFMAD
PATEQYHFIGKDIITFHTLFWPAMLHFSGRKTPNAVFVHGFLTVNSEKMSKSRGTGLDPL
KYLSLGMNPEWLRYYLATKLTARNEDVEFSPEDFMARVNSDLVGKYINIASRAAGFIAKR
FGGQLGVISDDGAALLKQIQIERTSIEQLYEAREFAKALRETMLLADRVNEYVDANKPWE
LAKQTGMETRLHDVCTVCIEAFRALTAYLKPVLPLLAAQVEVFLNIEPLSFASVSQTLGA
VHRIGDYKHLMQRVDIKQLEALFEAQAPVEPDNIATESVAPGGEGMAPVISMDDFSKIDL
RIAKIVNCETVSGSTKLLRLTLDVGETNTRNVFSGIASSYQPEQLIGKLTVMVANLAPRK
MKFGISDGMVLAASHADEKAQPGIYILEPFAGAQPGMRVH
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgccacgccaactcttcgttaccaccgccctgccctacgccaatggcaatttccacatt
ggccacatcatggagtacatccaggctgacatctgggtgcgctaccagcggatgatgggc
aacgcggtgcattttgtctgcgccgatgattgtcatggcgcgccgatcatgattgccgct
gaaaaggtcggtaaaacaccgcagcagtttgtggccgacattgccagcggccgcaaaccg
tatctggatggtttccatattggttttgacaactggcattccaccgacggcgcggaaaac
cacgaactggcgcaggcgatataccgtgatctcaaggccgctggcttgatcagcacgcgt
gtcatcgcccagtttttcgacaccgagaagaacatgtttttgccggaccgcttcatcaag
ggcgaatgtcccaagtgcggcgccaaagaccagtacggcgacaactgcgaagaatgcggc
gcggtgtacagcccgaccgagttgaagaacccgtactcggccttgagcggtgtcacccct
gtgctacgcgattcggaacattactttttcaaattgtcggacccgcgatgtgttgaattt
ctggaacagtggacgacggacaccaacccgcgcgggcagtcgcgcctgcaagccgaggtc
tacaacaagatcaaggaatggctgctgcccgatgccgagggcaagcgtgacctgggcgac
tgggacatctccagagacgcaccctactttggcatcgaaattcccgatgcgccgggcaaa
tatttttatgtctggctggatgcccccatcggttacctggccgcgctgaaaaaccgtttt
atcaagctggccggcgacgccacaacgggcgcgcagcattacgacgacttcatggccgac
ccggcgaccgagcagtaccacttcatcggcaaggacatcatcactttccacaccctgttc
tggcccgcgatgctgcatttcagcggccgcaaaacgcccaacgcggtgtttgtgcacggc
tttttgacggtcaacagcgagaagatgagcaagagccgcggcaccggcctggacccgctc
aagtacctgagcctgggcatgaacccggagtggctgcgctactacctggcgaccaaactg
acggcacgcaacgaggacgtggagttcagcccggaagatttcatggcgcgggtcaacagc
gacctggtcggcaaatacatcaacatcgcgtcacgcgcggccggctttattgccaagcgt
tttggcggccagctgggcgtcatttcagacgacggggcggcgctgctgaaacagattcag
attgagcgcaccagcatcgagcaactttatgaggcgcgcgaatttgccaaggccttgcgc
gagaccatgctgctggccgatcgggtgaatgagtatgtggatgccaacaagccctgggaa
ctggccaagcaaaccggtatggagacacgcctgcacgatgtctgcacggtctgcatcgaa
gccttccgggcactcacggcctacctcaagccggtgctgcccctgctggcggcgcaggtg
gaagttttcctcaatatcgagccgctctcctttgccagcgtcagtcagacgctgggtgcg
gtccaccgcattggggactacaagcacctgatgcagcgcgtcgatatcaagcaacttgag
gcattgtttgaggcgcaagcccccgtggaacctgataatattgctacagaatcagtagca
cctggcggagaaggcatggccccggtgatcagcatggatgacttcagcaagatcgacttg
cgtattgccaagatcgtcaattgcgagacagttagtggctctaccaagctcttgcgcctg
actttggatgtaggcgaaaccaacacgcgcaacgtcttcagcggcattgcaagcagctac
caacccgagcagctgatcggcaaactcaccgtcatggtggccaacctggcgccgcgcaaa
atgaagttcggtatcagcgacggcatggtgctggccgccagccatgccgacgaaaaagcc
cagcccggcatttatatcctggagccgtttgccggggcccaaccgggcatgcgggtgcat
tga
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