Rhodoferax ferrireducens: Rfer_3396
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Entry
Rfer_3396 CDS
T00334
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
rfr
Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfr02000
]
Rfer_3396
Transporters [BR:
rfr02000
]
Other transporters
Pores ion channels [TC:
1
]
Rfer_3396
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
OMP_b-brl_3
Plug
Motif
Other DBs
NCBI-ProteinID:
ABD71105
UniProt:
Q21SZ8
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All DBs
Position
complement(3778264..3780909)
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AA seq
881 aa
AA seq
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MNALPIKPRHLLRASVCALFATNMSPALAQSGAGTHSTLPAPDDNAQTGVLREVVVVGVR
ASLASAQEIKRDKLEIVDSIVADDITKLPDFSVTDALQRVTGLQIARDRGDGTGISIRGL
TQMETTLNGREVFTAGAGRNFDFADMASELVSGIDVYKTSSAEHIEGGVGGLIDLRTRRP
FDFKGREIVGSTRLIYGDLADRNATQFSVLASNRWKTTSAGEFGVLVNLAYQDRAFREDQ
KGTGNPQARTDLMAGQTVIAPNGTSETISLGNRKRSTAHVVLQWRPAADLELYAEGSYTE
FQTRQNSWQSNVLASPALVPGSAAVFPGTNDVSHITWMNAPVSILSFARDTLDRTKQAAV
GGVWSGKALTLKSDVSYTQSSNTLFFSGLTLGGTAANFTQDLSTDVPSSSITGTNLLDPA
NLQYTGIAYRLRRFEGDQATVRLDGEYEVSDSLVNTLLAGVRYARRGASNASGLVVADAG
VAGIPVAALPQYAMVNPYDFYAGTASIRNTLVGNLDTARDAVGLRNAFGITTPIPATASP
LSLWDISEDTQAAYLMARFTATGLPLKGPLDGNIGLRVVSTHERVAGAQSVPATGAVVPV
HVDSRYTDYLPSVNLRYLLSPGLYLRAAASRTLTRPNFDQLSPSLTLLPNAINPALNQGS
AGNPELKPIRADNLDLAVEKYFNKSTAVHLTGFLKKVEGFVTTVSSPEVVDGVAYQVSRP
QNSAAADIKGFELGYQQFYDFLPSWLSGLGLQANYTYVDSETLDRTLGEKVALQNLSRHS
VNLIGMYEKGRLSARLAYNWRDKFLSGVTNIVGVGALPIYTRAYGWLDASLSYRFSEKIS
FVIAGTNLLGTRRSSYYGVETRPQSSWINDTQVSLAVTARF
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccttgccaatcaaaccaagacacctgttgcgggcaagcgtctgtgcgctgttc
gcgaccaatatgtcgccggcgttggcccagtccggcgccgggacccattcgaccttgccg
gccccggatgacaatgcccagaccggtgttctgcgcgaagtcgtcgtggtcggtgtgcgc
gccagcctggcctcggcccaggagatcaagcgcgacaagctcgaaatcgtcgactccatc
gttgccgatgacatcaccaagttgccggacttcagcgtcaccgacgcgttgcagcgcgtg
accggcctgcagattgcccgtgatcgcggggatggcaccggtatctccattcgcggtctc
acgcagatggagacgacgctcaatggccgcgaagtgttcacggccggggccgggcgcaat
tttgatttcgccgacatggcgtccgagctggtatccggcatcgacgtctacaaaacctcc
tctgccgagcacatcgagggtggggtgggcggattgatcgatctgcgcactcgccgtccc
tttgatttcaaaggccgtgagattgttggctcaacccggctgatctacggcgatctggca
gaccgcaatgcaacgcaattttctgtcctggcaagcaatcgctggaaaacgaccagcgcc
ggggagttcggcgtgctcgtgaatcttgcgtaccaggaccgcgcctttcgcgaggatcaa
aaaggcaccggcaacccacaagcccgcaccgatctcatggcgggtcagaccgtcatcgca
cccaacggaacatcggaaaccatcagtctgggcaatcgcaaacgcagcaccgcccatgtg
gtgctgcagtggcgcccggcggcagacctggaactctatgccgagggcagttacacggaa
tttcagacccgccagaactcctggcaaagcaacgtcttggcgtcaccggcgttggtgcct
ggcagcgctgccgtgtttccgggcacgaatgacgtgagccacatcacctggatgaacgcg
ccggtctcgattctgagcttcgcccgtgacacgcttgaccggacgaaacaggccgccgtg
ggcggggtttggagcggcaaggcgctcacgctcaagtcggatgtgagctacacccaaagc
agcaacactctctttttctccggcctgaccttgggcggcactgccgccaacttcacgcaa
gacctgtccaccgatgtccccagttcgagcatcaccgggacaaatctgctggaccccgcc
aatttgcagtacacgggtatcgcctaccgtttgcggcgcttcgaaggcgaccaggccacc
gttcggctggatggggaatacgaggtttcggacagcttggtcaatacgctcctggccggg
gtgcgttatgcccggcgtggtgccagcaatgcgtccggcctggtggttgccgacgccggc
gtagcaggtattccggtcgcagccctgccgcaatatgccatggtcaacccttatgatttc
tacgccggcacggccagcatccgcaacaccctggttggcaatctggatacggcccgcgat
gccgtgggactgcgcaacgcctttggcatcaccacgccgatccccgccacagcgagcccg
ctgagcctgtgggacatcagcgaggacacgcaggcggcgtatctcatggcccggttcacg
gccacgggcctgccgttgaagggtccgctggatggcaacatcggcctgcgcgtggtcagt
acccatgagcgggtcgcgggcgcccagtcggtgccggccaccggcgcggtggtgcccgtc
catgtcgacagccgttacaccgactacctgcccagcgtgaacctgcgctacctgctcagc
ccggggctgtatcttcgtgcggcggcctccaggaccctgacgcgaccgaatttcgaccaa
ctctcaccttcactgacgctgctgccaaacgccatcaacccagcgctgaatcagggtagc
gcgggcaatccggaactcaagccgatccgcgccgacaatctggatctggcagtggaaaaa
tatttcaacaagagcacggcagttcacctcaccggcttcctgaagaaagttgagggtttc
gtgaccacggtgagcagcccggaagtggtggacggcgtcgcgtaccaagtgagccgtccg
caaaacagcgccgcggccgacatcaagggtttcgagcttggctaccagcagttctacgat
ttcctgccgtcctggctgagcggccttggcctgcaggcgaactacacctatgtcgacagc
gagaccctcgaccgcaccctgggtgaaaaggtggcgctgcaaaatctctccaggcacagc
gtcaacctcattggcatgtacgagaagggcaggctgtcagctcgcctcgcctacaactgg
cgcgacaaattcttgagcggtgtcaccaacatcgtgggcgtcggtgcactgcccatttac
acccgggcctacggctggcttgacgcgtcgctgagctatcgattcagcgagaaaatctca
ttcgtgatcgcgggcacgaacttgcttggcacgaggcgcagttcttactacggtgtggaa
acaagacctcagagtagctggatcaacgacacgcaagtcagccttgctgtgaccgctcga
ttctga
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