Rhodoferax ferrireducens: Rfer_3424
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Entry
Rfer_3424 CDS
T00334
Name
(GenBank) UDP-N-acetylmuramate--L-alanine ligase
KO
K01924
UDP-N-acetylmuramate--alanine ligase [EC:
6.3.2.8
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00550
Peptidoglycan biosynthesis
rfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rfer_3424
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rfr01011
]
Rfer_3424
Enzymes [BR:
rfr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.8 UDP-N-acetylmuramate---L-alanine ligase
Rfer_3424
Peptidoglycan biosynthesis and degradation proteins [BR:
rfr01011
]
Precursor biosynthesis
Amino acid ligase
Rfer_3424
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
ABD71133
UniProt:
Q21SX0
LinkDB
All DBs
Position
complement(3808965..3810398)
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AA seq
477 aa
AA seq
DB search
MKHAIKHIHFVGVGGVGMSGIAEILLNLGYTISGSDLADSATLQRLASLGIQTYVGHEAA
HVAGADAVVTSTAVQADNPEVLSAREKHIPVVPRAVMLAELMRLKTGIAIAGTHGKTTTT
SLVASVLAEAGLDPTFVIGGRLNSAGVNARLGQGDYIVVEADESDASFLNLSPVMAVVTN
IDADHMETYGHDFGRLKQAFVDFLHRMPFYGTAILCTDDPAVRDIVPQVTCPISSYGFEE
GAELRAVNVRAVDGQMHFTVQRRNGVVLPDLDVVLNLAGRHNVLNALSAIAVAVELNIAD
AVVQKALAGFKGVGRRFQRYGEVRAQDGGTFTLIDDYGHHPVEMAATLAAARGAFPGRRL
VLAFQPHRFTRTRDCFEDFIKVIAQADAVLLAEVYGAGEAPIVAADGRTLARALRVAGRI
EPVFVDDIAAMPQAIADNARDGDVVLCMGAGSIGAVPAKVLEMLQISELIPQGGRGL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacgcgatcaaacacatccactttgtcggtgtcggcggtgttggcatgtccggc
atcgccgagatcttgctcaatctgggctacaccatctccggctcggacctggccgacagc
gccaccttgcagcgcctggccagcttgggcatccagacctatgtgggccacgaggcggcc
catgtggcgggcgccgatgcggtggtcacctccaccgccgtgcaggccgacaaccccgaa
gtgctgagcgcacgcgagaaacacattccggtggtgccgcgcgccgtgatgctggccgag
ctgatgcggctgaaaaccggcatcgccattgccggcacccacggcaagaccaccaccacc
agcctggtcgccagcgtgctggccgaggccggcctggacccgacctttgtgattggcggg
cgcctcaacagtgccggcgtcaatgcgcgtttggggcagggcgattacatcgtggtcgag
gccgatgagtccgacgcctcgttcctgaacctgtcgccggtgatggcggtggtgaccaat
atcgacgccgaccacatggagacctatggccatgactttggccgcctcaaacaggcgttt
gtcgattttctgcatcgcatgcctttttacggcaccgccattttgtgcaccgatgatcct
gccgtgcgtgacatcgtgccgcaggtcacctgcccgatcagcagctatggttttgaggaa
ggcgctgaactgcgcgccgtgaatgtgcgcgcggtggatgggcaaatgcatttcacggtg
cagcggcgcaatggcgttgtgctgcccgacctggatgtggtgctgaacctggctgggcgg
cacaacgtgctcaatgccctgtcggcgattgcggtggcggtggagctcaacatagcggac
gcagtggtgcaaaaagccctggctggcttcaaaggcgtcgggcggcgtttccagcgttac
ggcgaggtgagggcccaggacggcggcacgttcacgctgattgacgactatggccatcat
ccggtcgagatggcggccacgctggcggcggcgcgcggggcttttccgggtcggcgtctg
gtgctggcgttccagccgcatcgtttcacccgcacgcgcgactgcttcgaagacttcatc
aaagtgattgcgcaggctgacgcggtgttgctggccgaagtctacggcgccggcgaagcg
ccgattgtggcggccgatggccgtacgctggcgcgggcgctgcgtgtggcgggtcgcatc
gagccggtgtttgtcgatgacatcgccgcgatgccgcaggccattgcggacaacgccagg
gatggcgatgtggtgctgtgcatgggcgccggctcgatcggcgccgtgccggccaaggtg
cttgagatgctacaaatttcagagctaataccgcagggaggacgtgggctatga
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