Rhodoferax ferrireducens: Rfer_3427
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Entry
Rfer_3427 CDS
T00334
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00470
D-Amino acid metabolism
rfr00550
Peptidoglycan biosynthesis
rfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Rfer_3427
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rfer_3427
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rfr01011
]
Rfer_3427
Enzymes [BR:
rfr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Rfer_3427
Peptidoglycan biosynthesis and degradation proteins [BR:
rfr01011
]
Precursor biosynthesis
Amino acid ligase
Rfer_3427
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
2-Hacid_dh_C
Sacchrp_dh_NADP
NAD_binding_7
ThiF
XdhC_C
RIM2a_ZnF
Pyr_redox
F420_oxidored
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
ABD71136
UniProt:
Q21SW7
LinkDB
All DBs
Position
complement(3813434..3814954)
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AA seq
506 aa
AA seq
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MNALQDQHVLILGLGASGLAMARWCARCGARVTVADTRSAPPQLAALQRELPAAQFISGA
FDAALVVGTDVRAVFKSPGLSPLDVATVIEAANTIGIRATGELGLFSQALADLKATQNYT
PKVLAVTGTNGKTTVTALTGLLVERGGKSVAVAGNIGPTLLDTLIQHLAAGTLPEVWVIE
LSSFQLEGETGFEPSAAAVLNITQDHLDWHGSMAAYVAAKAHVFGATGLMILNREDPQVM
AMLPEPVRVKLQRPQLRAHVTFGADLPRRPGDFGLEQVNGMLWLVRALEADETLKNRKGE
TPELFLQRLMPADALRIRGRHNAVNALAALALAQAAGCALGPMLYGLRDYRGEPHRVAPI
GIFNEVEFFDDSKGTNVGATVAALAGLGSERKVIVILGGEGKGQDFAPLVDPVSRYARAV
VLIGRDAPLLRAALQATHVPLLEAESMAQAVALANAQAHAGDAVLLSPACASFDMFDNYE
HRAQVFAQAVGELASAAGAAWEGAAP
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgctgcaagaccaacacgtgctgattctgggcctgggcgcctcgggcctggcc
atggcgcgctggtgtgcgcgctgcggcgcgcgggtgacggtggctgacacgcgcagcgcg
ccgccacagctggccgccttgcaacgcgagttgcccgcggcccagttcatcagcggtgcc
tttgacgcagcgcttgtcgtgggcaccgatgtgcgcgcggtgttcaagagtccaggtttg
tcaccgcttgatgtcgctacagttatagaagctgctaacacaattggcatcagggctaca
ggcgaattaggcttgttttcccaagcactggctgacttgaaggcaacgcagaattacacg
ccaaaagtgctggccgtcacaggcaccaacggcaagaccaccgtcaccgcactgaccgga
ctgctggtggagcgcggtggcaaaagcgtcgcggtggccggcaatatcggaccgaccttg
cttgacacgctgatccagcatctggcggccggcacactgcccgaggtctgggtcatcgag
ttgtcgagctttcaactggagggcgaaacaggcttcgagcccagcgccgctgcggtgctc
aacatcacgcaagaccatctggactggcatggcagcatggcggcttacgtggccgccaag
gcccatgtctttggcgcgaccggcctgatgattttgaaccgggaagacccccaggtcatg
gcgatgctgccagagccggtgcgggtcaagctgcaacgcccccagctacgcgcccatgtc
accttcggcgctgacctgccgcgacgtccgggcgacttcggactggagcaggtcaacggc
atgctgtggctggtgcgcgcgctggaggccgacgaaacgctcaagaatcgcaagggtgaa
acgcccgagctgtttctgcagcgcctgatgccggccgacgccctgcgcattcgcggccgc
cacaacgcagtcaacgcgttggcggcgctggcattggctcaagccgccggctgtgcgctg
ggcccgatgctctacggcctgcgcgactaccggggcgagccgcaccgggtggcgccgatt
ggcatcttcaatgaagtggaattcttcgacgacagcaaaggcaccaatgtaggtgcgacg
gtggcggcgctcgccggcctggggtctgagcgcaaggtgatcgtcatcctgggcggcgag
ggcaaggggcaggacttcgcgccgctggtcgatccggtgtcgcgctacgcccgcgccgtg
gtgctgatcgggcgcgacgctccgctcttgcgcgctgcgctgcaagccacccacgtgccg
ctgctggaggccgagtccatggcgcaggcagtcgcgctggccaatgcccaggcgcacgcg
ggcgacgcggtgctgctgtcgccagcctgtgccagctttgacatgtttgacaactacgag
caccgggcccaggtgttcgcgcaagcggtgggcgagctcgccagcgccgccggggcggcg
tgggaaggtgctgcgccatga
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