Rhodoferax ferrireducens: Rfer_3442
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Entry
Rfer_3442 CDS
T00334
Name
(GenBank) phage integrase
KO
K03733
integrase/recombinase XerC
Organism
rfr
Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rfr03036
]
Rfer_3442
Chromosome and associated proteins [BR:
rfr03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
Rfer_3442
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
DUF3435
Motif
Other DBs
NCBI-ProteinID:
ABD71151
UniProt:
Q21SV2
LinkDB
All DBs
Position
complement(3831381..3832394)
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AA seq
337 aa
AA seq
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MTRAPSGASTAHEVTAVGTDLVERYLEHVRVEKRLAQRTVELYALDLQKLSQQAAQAGVE
LLQVQNSHIRRWVAQMNAGGRSGRGIALILSGWRGFYVWLGREGLISSNPVQDVRAPKAG
KPLPKALSVDQAVQLASFASGSNDPWLEARDAAMVELLYGAGLRVGELTGLDTVASSSAR
GWIDLQGGEAHVLGKGGKRRSVPVGAKAVLAITHWLALRDQALAQAKPGLQGPGGNAQAA
LFMGRNGTRLSAQSIWQRLRQRSLQAGLTTPVHPHMLRHSFASHLLQSSSDLRAVQELLG
HASITTTQAYTRLDFQHLAKAYDAAHPRAKIKGATPK
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcgcgccctcaggggccagcacagcacacgaagtgaccgccgtgggaacggat
ttggttgagcgctacctggagcacgtgcgggttgaaaaacgcctggcgcaacgcacggtc
gagttgtatgcgctggacctgcagaagctgtcccagcaggccgcgcaggcaggggtcgaa
ctgcttcaggtgcaaaacagccacatccggcgctgggtggcccaaatgaatgccggcggg
cgcagtggccgcggcattgccctgattctgtcgggctggcgcggcttctacgtctggttg
gggcgcgaaggcctgatcagcagcaacccggtgcaggatgtgcgtgcgcccaaggcgggc
aagccgctgcccaaagccctgagtgtggaccaggccgtccaactggccagctttgcgagc
ggcagcaacgacccgtggctggaggcgcgcgacgccgccatggtggagctgctgtatggc
gcaggcctgcgggtgggcgagttgaccggactggacacggtggccagtagcagcgcacgc
ggctggatcgatttgcagggtggtgaagcccatgtgttgggcaagggcggcaaacggcgc
agcgtgccggtgggtgccaaggcggtgcttgccatcacccactggctggcgctacgcgat
caggcgctggcgcaagccaagccgggtctgcaggggccgggcggcaacgcccaggccgcg
ctgtttatgggacgcaatggcacccgcttgagcgcccaatcgatctggcagcgcctgcgc
caacgcagcctgcaggcgggcttgacgacaccggtgcatccccacatgctgcgccactcg
tttgccagccacctgttgcagtccagcagcgatttgcgcgcggtgcaggagttgctgggc
cacgccagcatcaccacgacccaggcctacacccggctcgacttccagcatttggccaag
gcgtacgatgcggctcatccgcgggcgaaaatcaagggggcgaccccaaaatag
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