Rhodoferax ferrireducens: Rfer_3710
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Entry
Rfer_3710 CDS
T00334
Name
(GenBank) sigma 28 (Flagella/Sporulation)
KO
K02405
RNA polymerase sigma factor FliA
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr02020
Two-component system
rfr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rfer_3710
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Rfer_3710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfr03021
]
Rfer_3710
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
rfr02035
]
Rfer_3710
Transcription machinery [BR:
rfr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Rfer_3710
Bacterial motility proteins [BR:
rfr02035
]
Flagellar system
Flagellar assembly proteins
Stator
Rfer_3710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
UPF0122
HTH_23
HflK_N
HNH_repeat
TgpA_N
Motif
Other DBs
NCBI-ProteinID:
ABD71410
UniProt:
Q21S43
LinkDB
All DBs
Position
4143189..4143905
Genome browser
AA seq
238 aa
AA seq
DB search
MYTAKGQLDRNAMIRQYQPLVRRLAHHMMAKLPANVEVDDLIQVGLIGLSEALTRYEAAQ
GVQFETFATQRIRGAMLDELRGNDWMSRGSRKSQKDIEQALRRLEHKLGRTPLESEIAAD
LGLSLVDYQTLLGKVRGTQLVYLEDMARGNDEEDSFLDRHVGDSDADPMNVLRDQRLRQA
LVAAIKNLPEREQFIMSMYYEQDMNLKEIAAVLDVTESRICQLHSQSIARLRAKMRAH
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccgccaaggggcaattggaccgcaacgccatgatccggcagtaccagccgctg
gtgcggcgcctggcccaccacatgatggccaaattgccggccaacgtcgaagtcgatgat
ctgatccaggtcgggctgatcggcttgtcggaggccctgacccgctacgaggccgcgcag
ggtgttcaatttgaaacctttgccacgcagcgcattcgcggcgccatgctcgacgagctg
cgcggcaacgactggatgtcgcgcggctcgcgcaagagccagaaagatatcgaacaggcg
ctgcgccggctggagcacaagctcgggcgcacaccgctggagagtgaaattgccgccgac
ctgggcttgagtctggtcgactaccagacgctgctgggtaaagtgcgtggcacccaactg
gtgtacctggaagacatggcgcgtggcaacgacgaggaagacagttttctggatcgccac
gtcggtgacagcgacgccgacccgatgaacgtgctgcgcgaccagcgcttgcgccaggca
ctggtggccgccatcaagaacctgcccgagcgcgagcagttcatcatgagcatgtactac
gagcaggacatgaatctgaaagagatcgcggccgtgctggatgtcaccgagtcgcgcatt
tgccagttgcacagtcagtcgatcgcgcgcttgcgcgccaagatgcgggcccattga
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