Rhodoferax ferrireducens: Rfer_3830
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Entry
Rfer_3830 CDS
T00334
Name
(GenBank) 3-methylcrotonoyl-CoA carboxylase, alpha subunit
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00280
Valine, leucine and isoleucine degradation
rfr01100
Metabolic pathways
Module
rfr_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Rfer_3830
Enzymes [BR:
rfr01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
Rfer_3830
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
BT_MCC_alpha
ATP-grasp
Biotin_lipoyl_2
Dala_Dala_lig_C
HlyD_3
LAL_C2
NDUF_B12
RnfC_N
DUF2118
GCV_H
PTS_EIIA_1
NQRA_N
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
ABD71529
UniProt:
Q21RS4
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All DBs
Position
complement(4273722..4275746)
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AA seq
674 aa
AA seq
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MFNKILIANRGEIACRVAATARRMAIKTVAVYSDADANAKHVSVCDEAVYIGGSAPKDSY
LRWQNIIAAAQATGAQAIHPGYGFLSENEEFARACLDAGLVFIGPPSSAILAMGLKAESK
RLMGLAGVPLVPGYHGADQDPALLQREADAIGYPVLIKASAGGGGKGMRVVANAADFASA
LASCRREAINSFGNDAVLIEKYVQRPRHIEIQVFGDTLGNYVYLFERDCSVQRRHQKVLE
EAPAPGMTPALRQQMGEAAVAAAQAVNYVGAGTVEFIVEQRPDGSMDFFFMEMNTRLQVE
HPVTEAITGQDLVEWQLRVAAGEALPLRQDQLKITGHAIEARICAENPDNNFMPATGTLQ
VYGLPACVTFERSNGGVRVDSGVREGDAISPFYDSMLAKLIVHGDSREQALSRLDTALAQ
THIVGLNTNVQFLRHVVQSRSFVQADLDTGLIPREEAVLFKQEKVGLSLAVASVIAHTLQ
QERCAQAQLAERAGWLDPWARRDGWRSHGPSTRRFDYAFQGQVHIVQLTTLHDGALQLAV
AGEVGGFSFVPLTQGIDVRFAARRQIVSVYRKDAVAHVFTAQGATEIIAIDALAHAGDSQ
VEGGRLTAPMPGKVVSFAVKAGDKVSKGQPLAVMDAMKMEHTIAAPMDGVVAELLYAPGD
QVVEGAELLKLVAQ
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaaattctgattgccaaccggggcgagatcgcctgccgcgtcgccgccacc
gcgcgtcgcatggccatcaaaacagtggcggtctattccgatgccgatgccaacgccaaa
cacgtcagcgtgtgtgacgaggccgtctatatcgggggcagcgcgcccaaagacagctac
ctgcgctggcaaaacatcattgcggcagcccaggctaccggggcgcaagccatccacccc
ggctacggtttcttgagtgaaaacgaagagtttgcgcgcgcctgtcttgatgccggcctg
gtgtttattggcccgccgtcgtccgccattttggccatggggctcaaagccgagtccaag
cgcctgatgggcctggccggggtgccgctggtgcccggctaccacggcgccgaccaggac
ccggctttgctgcagcgcgaggccgacgccatcggttacccggtgctgatcaaggccagt
gccggcggcggcggcaagggcatgcgggtggtggccaacgcggcggactttgcatcggcg
ctggcctcctgccggcgcgaggccatcaacagctttggcaatgacgcggtgctgatcgaa
aaatacgtgcagcgcccgcgccacatcgagattcaggtgtttggcgacacgctgggcaac
tatgtgtacttgtttgagcgcgactgctcggtgcagcgccgccatcaaaaggtgctggaa
gaagcgcccgcgccgggcatgacacccgcgctgcgccaacagatgggcgaggcggccgtg
gctgcggcgcaggccgtgaactatgtgggggctggcacggtggagttcatcgtggagcag
cgcccggacggttccatggattttttcttcatggaaatgaacacgcgcctgcaggtggag
catcccgtgaccgaagccatcaccggccaggacctggtggagtggcagctgcgggtggcc
gccggcgaggcgctgccgctgcgccaggaccagctcaagatcaccggccacgcgatcgaa
gcccgcatttgcgcggaaaacccggacaacaacttcatgcccgccaccggcaccctgcag
gtgtatgggctgcccgcatgcgtcacgtttgagcgcagcaatggcggcgtgcgcgtggac
tccggcgtgcgcgaaggtgatgccatcagcccgttctacgactccatgctggccaagctg
atcgtgcatggcgacagccgggaacaggcgctctccaggctggacaccgcgctggcccag
acccacatcgtcgggctcaacaccaatgtgcagttcttgcgccatgtggtgcaaagccgc
tcctttgtgcaggcggacctggacaccgggctgattccccgtgaagaggccgtgttgttc
aagcaggaaaaagtcggtttgagcctggccgtggccagtgtgattgcgcataccttgcag
caggaacgctgcgcccaggcgcaactggccgagcgcgcgggctggctcgacccctgggcc
cggcgtgacggctggcgctcgcacggaccgagcacgcgccgcttcgactacgcgtttcag
ggccaggtgcatatcgtgcagctgacgaccttgcacgacggtgccttgcaactggcggtg
gcgggtgaggtcggcgggttttcgtttgtgccgttgacgcaaggcatcgatgtgcgcttt
gcggcccggcgccagattgtcagtgtctatagaaaagacgctgtagcccacgtatttact
gcacaaggagctacagaaataatagcaattgacgccctggcgcacgctggcgacagccag
gtggaaggcgggcgcctgacggcgccgatgccgggcaaggtggtgtcgtttgccgtcaag
gccggtgacaaggtcagcaagggccagccgctggcggtgatggacgccatgaagatggag
cacaccattgccgccccgatggacggcgtggtcgccgaactgctctacgcgcccggcgac
caagtggtggaaggggccgagctgctcaagctggtggcgcagtaa
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