Rhodoferax ferrireducens: Rfer_4088
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Entry
Rfer_4088 CDS
T00334
Name
(GenBank) hydrogenase (NiFe) small subunit (hydA)
KO
K06282
hydrogenase small subunit [EC:
1.12.99.6
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00633
Nitrotoluene degradation
rfr01120
Microbial metabolism in diverse environments
rfr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00633 Nitrotoluene degradation
Rfer_4088
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rfer_4088
Enzymes [BR:
rfr01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.99 With unknown physiological acceptors
1.12.99.6 hydrogenase (acceptor)
Rfer_4088
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Motif
Pfam:
Oxidored_q6
NiFe_hyd_SSU_C
Motif
Other DBs
NCBI-ProteinID:
ABD71786
UniProt:
Q21R17
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Position
4562588..4563769
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AA seq
393 aa
AA seq
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MGDMNELFDLGSDAFHGVEQRLGMSRRDYLQFCTTLAVTMGLPKGAEAAVAKAIETSQRP
SVIWLHFQECTGCSESLLRAEHPTLEKLILDVISLDYHETLMAAAGHQAEAARKDAMKTH
KGKYVLVVEGAIPVKDNGIFCKIGDHTAIDLVKECAADAAAVIAIGSCASWGGMPSTGPN
PTGASSVAEVLGKSVVTIPGCPPNPYNFLATVVHFLTFGKLPDVDKLGRPKFAYSRLIHE
NCERRAHFDAGRFAMEFGDAGHRQGYCLYKLGCKGPETYANCSTIGFGDAGENNWPVGCG
HPCIGCSEKGVGFTKPIHQVATVINIVPPQQYPRIVEEQGKGASFASAAALAALAGAAAG
AAVMLTRNLGLSHAASEAERAKAEGKSKDQAQV
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatatgaatgagctatttgacttggggtccgatgcgttccatggcgtcgagcaa
cgcctgggtatgtcaaggcgtgactatctgcaattttgcaccacgctagcggtcaccatg
ggactgccaaaaggcgccgaagctgcggtggccaaggcaatagaaaccagccagcgtcca
tcggtgatctggctgcactttcaggagtgcacgggctgctcggagtcgctgttgcgggct
gaacatccaacgctggaaaagctgattctggacgtcatctcgctcgactaccacgagact
ttgatggccgccgccgggcaccaggccgaggccgcccgcaaagacgcgatgaagacccac
aaaggcaaatatgtgctggtggttgaaggcgccattccggtcaaggacaacggcattttc
tgcaagatcggggaccacaccgcgattgatctggtcaaagaatgtgccgctgatgcggcg
gcggtgatcgccattggctcttgtgcctcctggggaggtatgccgtctaccggccccaat
ccgaccggcgcctccagtgtggccgaggtgctgggcaagtctgtggtcaccatccctggt
tgcccgcccaacccctataactttctcgccaccgtggtgcactttctgacctttggcaag
ctacctgacgtcgacaaattggggcgccccaaatttgcctactcgcgcctgattcatgaa
aactgtgaacgccgcgcgcacttcgatgccgggcgctttgcgatggagtttggtgatgcg
ggccatcgtcagggctactgcctctacaagctgggctgcaaagggccggaaacctatgcc
aattgctcaaccataggatttggcgacgcgggcgaaaacaactggccggtcggctgtggc
cacccctgcatcggttgcagtgaaaaaggcgtgggctttaccaagccgattcatcaggtc
gccacagtgatcaatatcgtgccaccgcaacagtatccgcgcattgtggaagaacaaggc
aagggtgcgtcctttgcctctgctgctgcgctcgctgcgttggccggcgccgcggctggc
gctgccgtgatgttgacgcgcaatctgggcttgtcgcacgcggcatccgaggccgagcgc
gccaaagctgaaggcaagtccaaagaccaggctcaggtgtaa
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