Rhodoferax ferrireducens: Rfer_4139
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Entry
Rfer_4139 CDS
T00334
Name
(GenBank) Methionine gamma-lyase
KO
K01761
methionine-gamma-lyase [EC:
4.4.1.11
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00270
Cysteine and methionine metabolism
rfr00450
Selenocompound metabolism
rfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Rfer_4139
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Rfer_4139
Enzymes [BR:
rfr01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.11 methionine gamma-lyase
Rfer_4139
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Gene cluster
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Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Met_gamma_lyase
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ABD71835
UniProt:
Q21QW8
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Position
complement(4611688..4612860)
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AA seq
390 aa
AA seq
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MTHLRTRAVHAGQHPDPGTGAIATPISQTTAFGYGTLEHGAAIFAGEAPGYRYSRFANPT
VAALEAKMADLEGAQAAVAFSSGTAATSSVLLGLLNPGDEIAFLGPLYGGTEGLFRAVGE
RFGIRVVDATQQGLAASLTPATRMVWVETLTNPSLRLHDLAEVAAIAKARGVLTVADNTF
CTPCLVRPLAYGIDLAMHSMTKYLGGHGDATGGIVAGSVALIAPVRKTGLGHVGGNLSPQ
EAFLFLRGIKTLPLRMAAHCEGAAAVAHFLAGHPAVRVVHYPGLASHPQHALARRLLQGG
FGGMVAFELVRNERSAAAAVLNRLQLFTQAVSLGDVDSLACHPASTTHSFVTAAVRAQNG
VTEGLIRLSVGIEHPDDLMADLEHALRHAV
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgacccaccttcgcacccgggctgtccatgccgggcagcaccctgacccgggcaccggc
gccattgccacgcccatcagccagacgaccgcctttggctatggcacgctggagcacggt
gctgctatctttgcaggcgaggcgccgggctaccgttacagccgctttgccaaccccacc
gtggcggcgctggaggccaagatggccgaccttgaaggcgcgcaggcagcagtggctttt
tccagcggcacggcggccacgtcttcggtgctgctggggctattgaatccgggggacgaa
atcgcgttcctcggaccgctgtacggcggcaccgaagggctttttcgcgcggtgggtgag
cgctttggcatccgggttgtggacgccacgcagcagggcctggctgccagcctcacaccg
gctacacgcatggtgtgggtggagacgctgaccaatcccagcctgcgcctgcatgatctg
gctgaagtggccgccattgccaaagcgcgcggcgtgctcacggtggccgacaacactttc
tgcacgccgtgcctggtgcggccactggcgtacggcattgacctggcgatgcattccatg
accaagtacctgggtgggcatggtgacgccacgggcggcatcgtggcaggctcggtcgca
ttgatcgcgccggtgcgcaagaccggcctgggccatgtggggggtaacctgtcgccgcag
gaagcgtttctatttctgcgtggcatcaagacgctgccactgcgcatggcggcacactgc
gagggcgcggctgcggtggcccatttcctggcgggccaccctgcggtgcgggtggtgcat
tacccgggtcttgccagtcacccgcagcatgcgctggcgcggcgcctgttgcagggcggc
tttggcggcatggtggctttcgagctggtgcgcaacgagcgctctgccgctgcggccgta
ttgaaccggctccagctattcacccaggcggtctcattgggtgacgtggacagcctggcc
tgtcatccggcgagcaccacgcacagctttgtcacggctgcggtgcgagcccaaaatgga
gttaccgaagggctgatccggctcagcgtgggcatagagcatccggacgacctgatggct
gaccttgaacatgcgttaagacatgctgtttaa
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