Rhodoferax ferrireducens: Rfer_4157
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Entry
Rfer_4157 CDS
T00334
Name
(GenBank) transcriptional regulator, GntR family
KO
K05836
GntR family transcriptional regulator, histidine utilization repressor
Organism
rfr
Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfr03000
]
Rfer_4157
Transcription factors [BR:
rfr03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Rfer_4157
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_DeoR
HTH_Crp_2
MarR
HTH_IclR
MarR_2
HTH_24
TrmB
HTH_11
RP-C
Rrf2
HTH_41
LacI
SAMD1_WH
HTH_Tnp_4
DUF5817_CT
Motif
Other DBs
NCBI-ProteinID:
ABD71851
UniProt:
Q21QV2
LinkDB
All DBs
Position
complement(4628598..4629308)
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AA seq
236 aa
AA seq
DB search
MSASKLPAYEHVKAFVKSKINLGAWRAGDPVPSESALQQQFGVSRMTVSRALRELVVEGV
VTRVRGSGTVVAQLHRILSTLAFRDIEEEVLEREHAHATQVIVLESICANAALGQILKLP
TGAKVFHSVLVHYEDAVPIQFEDCHVNPQSAPHYLDNDFETTTSTQYLLEHAPLTETSYS
IEACLPSPREARCLRIKSSEPCLVMTRRIVSGLHVASLMRLVYPGMRYSFGGKFQL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgagcaagctgccagcgtacgaacacgtcaaggcctttgtcaagagcaagatc
aacttgggggcctggcgtgcgggcgaccctgttcccagcgaatcggctttgcagcagcag
tttggcgtcagtcgcatgaccgtgagtcgggcgctgcgcgagttggtggtggaaggcgtg
gtgacccgggtgcggggctcgggcacggttgtggcgcagttgcatcgcatcctgagcacg
ttggcatttcgagacatagaggaggaggttcttgagcgtgagcacgctcatgccacccaa
gtcatagtgcttgaatcaatttgcgccaatgcggcgctggggcagatcctgaaactgcca
accggggcgaaagtgtttcactcggtgctcgtgcactacgaggacgcggtgccgattcag
ttcgaagattgccatgttaatccgcaatcggcgccacactacctggacaacgatttcgag
accacgacgtcgacccagtacctgctggagcatgcaccactcaccgaaaccagctattcg
atcgaagcctgcttgcccagccctcgggaggccaggtgtctgcgaatcaaaagcagtgag
ccctgtctggtgatgacccggcgcatcgtcagtggcctgcatgtggccagtctgatgcgc
ctcgtttaccccggcatgcgctacagttttggcggaaaatttcagctgtga
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