Rhodoferax ferrireducens: Rfer_4175
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Entry
Rfer_4175 CDS
T00334
Name
(GenBank) TRAP dicarboxylate transporter-DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rfer_4175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfr02000
]
Rfer_4175
Transporters [BR:
rfr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Rfer_4175
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
ABD71866
UniProt:
Q21QT7
LinkDB
All DBs
Position
4644416..4645699
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AA seq
427 aa
AA seq
DB search
MNAAIIFVLLLVLMLTGMPISISLGLTVLTFLFGFTHVPLESVALKLFTGIEKFEIMAIP
FFILAGNFLTHGGVAKRMINFASSMVGHWYGGLGLAGVMACALFAAVSGSSPATVVAIGS
ILLPAMTKAGFPNSFGAGVITTSGALGILIPPSIVMVMYSVATNTSVGALFMAGVVPGIA
LACVLGGVTWYRAKKFNYPRLPKATWAERFKAFKTSAWGLLLIVIVMGGIYTGMFTPTEA
AAMSAVYAFVVAVFVYKDMKLKDVPKVLLNSANMSAMLLYIITNAVLFSFIMTNENIPQA
LADWMLGNGLGMVSFLLAVNVMLLLAGNFMEPSSIVLIFAPILFPVAMKLGIDPVHFGII
MVVNMEVGMCHPPVGLNLYVASGITKMGITELTVAVWPWLLAMLGFLVLVTYWPPLSTWF
PRMLGMM
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgccattatttttgtcctcttgctggtgctcatgctcaccggcatgccaatc
tcgatttcactcggcttgaccgttctgacctttttgtttggctttacccatgtgccgctg
gagtcggtggcgctcaagctctttaccggcattgaaaagttcgagatcatggcgatcccg
ttcttcatcctggcgggtaactttttgacccacggcggcgtggccaagcgcatgatcaac
tttgcctccagcatggtcggccactggtatggaggcctgggcctggccggtgtgatggct
tgtgcgctgtttgcggcggtgtcgggttcctcgcccgccacggtggtggcgatcggctcg
atcttgctgccggccatgaccaaagcgggttttcccaatagctttggcgcgggcgtgatc
accacctcgggcgccttgggcattctgattccgccttcgatcgtgatggtgatgtattcg
gtggcgaccaacacctcggtcggcgccttgttcatggccggcgtggtaccgggcatcgca
ctggcctgcgtgttgggcggtgtcacctggtatcgggccaagaagttcaactacccgcgt
ctgcccaaggcgacctgggccgagcgcttcaaggctttcaagacctcggcctggggcttg
ctgctgatcgtgatcgtgatgggcggcatttacaccggcatgttcacgccgactgaagcg
gcggccatgagcgcggtctatgcgtttgtggtggccgtttttgtctacaaggacatgaag
ctcaaggacgtgcccaaagtgttgctcaactcggccaacatgtcggcgatgctgctctac
atcatcaccaacgccgtgctgttctccttcatcatgaccaatgagaacattccgcaggcg
ctggccgactggatgctgggcaacggcctgggcatggtcagcttcttgctggccgtgaac
gtgatgctgctgctggcgggcaacttcatggagccctccagcattgtgctgatcttcgcg
ccgatcttgttcccggtggccatgaagctgggcattgacccggtgcactttggcatcatc
atggtggtcaacatggaagtgggcatgtgccacccgccggtgggcctgaacctgtatgtg
gcctccggcattaccaagatggggattaccgagctgacggtggcggtctggccgtggctg
ctggcgatgctgggcttcctggtgctggtgacctactggccgcccttgtcaacctggttc
ccccgcatgctggggatgatgtag
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