Rhodoferax ferrireducens: Rfer_4217
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Entry
Rfer_4217 CDS
T00334
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Rfer_4217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfr03021
]
Rfer_4217
03400 DNA repair and recombination proteins [BR:
rfr03400
]
Rfer_4217
Enzymes [BR:
rfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Rfer_4217
Transcription machinery [BR:
rfr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Rfer_4217
DNA repair and recombination proteins [BR:
rfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Rfer_4217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF7286
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ABD71904
UniProt:
Q21QP9
LinkDB
All DBs
Position
complement(4692224..4693213)
Genome browser
AA seq
329 aa
AA seq
DB search
MQNSLLKPKAINVEQMGGNRAKVALEPFERGYGHTLGNALRRVLLASMPGYAATEVTIAG
VLHEYSSIDGVQEDVVNILLNLKGVVFKLHNRDEVTLSLRKDGEGLVTASDIQTPHDVEI
INPDHVIAHLSQGGKLDMQIKVEKGRGYVPGTMRRHGDEPTKSIGRIILDASFSPVKRVS
YTVESARVEQRTDLDKLVVDIETNGAISAEDAVRASAKILVEQLAVFAQLEGSELAAFDT
PSPRGSTQFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSL
NEIKEVLASRGLTLGMKLESWPPAALEKR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatagtttattgaaacccaaggccatcaatgtcgagcaaatgggtggcaatcgc
gccaaagttgctcttgagccctttgaacgcggatatggtcatacgctcggcaatgcattg
cgccgggtcttgctggcctcaatgcctggttatgccgccactgaagtgaccattgccggc
gtcttgcatgagtattcctctattgacggggtgcaagaagatgtcgttaatattttgttg
aatctcaaaggtgttgtgttcaagcttcacaaccgcgacgaggtgactctgagcctgcgc
aaagacggagaaggactggttacggccagtgacattcagactccccatgatgtcgagatc
atcaatcctgatcatgtgatcgcacacttgtcgcaaggcggcaagctggatatgcaaatc
aaggttgaaaaaggccgcggctatgtgcccgggacgatgcgtcggcatggggatgagccc
accaagtctattggacgtatcattttggatgcctccttttctcccgtaaagcgcgtcagt
tatacggttgagagtgcgcgtgttgagcagcgtacggatctcgacaagctagttgtcgat
attgaaaccaatggtgctatttctgctgaagatgcggttcgtgcctctgcaaagattttg
gttgagcaattggcggtgtttgcacagttggagggcagtgagttagccgcgttcgatacg
ccttcaccccgcggtagcacgcagtttgatcccattttgctgcgtccggtggatgagctt
gagctcacggttcgttcagcgaactgcttgaaggccgaaaatatttactatattggcgac
ctgattcaacgcacggaaaacgagttgttgaagacgccaaatctgggccgcaagtcgctc
aatgaaatcaaggaagtgctggcttcccgcggtctgactttaggcatgaagcttgaaagt
tggcctccagccgctctcgaaaagcgttaa
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