KEGG   Rhodoferax ferrireducens: Rfer_4258
Entry
Rfer_4258         CDS       T00334                                 
Name
(GenBank) hypothetical protein
  KO
K07344  type IV secretion system protein TrbL
Organism
rfr  Rhodoferax ferrireducens
Pathway
rfr02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rfr00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Rfer_4258
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rfr02044]
    Rfer_4258
Secretion system [BR:rfr02044]
 Type IV secretion system
  Trb secretion system protein
   Rfer_4258
SSDB
Motif
Pfam: TrbL DMAC1_Dmo2
Other DBs
NCBI-ProteinID: ABD71945
UniProt: Q21QK0
LinkDB
Position
plasmid1:complement(12974..14875)
AA seq 633 aa
MCFFQKCRALLGALIILSIPVPGLTAAAADGTDLSTCTLSPGGTLYTCGGGAIYNLNGTL
NTAPLVGPGAPGEAPMRPISDSELHQVDMASTIVNMMDGFFRPIDRMASFFTGSGTNIVY
ALVLITIAMGGIQLAAGTTDLFDLAIQGIKLSFVGSLVLACMVDQAWLGYLTGTGPTTIP
KEIERGFMSIMSGFSPTFAGTSVSSSSGEFLGAVISDLFTSIKIMMGLSFWDRGLSNPLT
IVSSFITLIPTILLWVFSVIAFCIAGALILGEAFATVIAIKLAFAFTGLLVPWLLFRPLQ
FLFDAWLKTLLISFTALVIAALFVAGMASFGTAIQAELARIPTTGFFSGPQIQAIMSPVF
IGSLILITIATKVNSMAQTLLSGGALSGIGIHAFSQAMKATQGVTSAPGGAAAKASGMTS
AGANMAKSVASKGMSMGKSAASGIGAVAGAAKAAASPGLGSAKTAFGNAMKGPGGSVMAG
AKAALPGIRSAGAGVMRATASGAKSAAVGGLQAAGGGIKSAAQSIANPASFGQSATASIA
TNKGLAPTKQESQQATRAGNRAFNEALAEGKGFSHAQIVGKRAVSGSLVTASKAPSTPKS
AGAASPATPPTPTTPAQSAGRFRPLRPTKKGNP
NT seq 1902 nt   +upstreamnt  +downstreamnt
atgtgcttcttccaaaaatgtcgtgccttgttgggggccttgattattctgtcaattcct
gtgccaggcctaactgcagcggccgcggacggtacggatttgtccacatgcaccctaagt
ccaggtgggactctctatacatgcggaggcggcgcgatttacaaccttaacggcacgtta
aacaccgcgccactcgtgggtcctggagcgccaggagaggcacccatgaggccgatttcg
gattctgaacttcatcaggtagacatggcatcgaccatcgttaacatgatggatggattc
ttccgcccaatcgacagaatggcctcattttttacgggctctggcacgaatattgtctat
gcgcttgtccttataaccatcgcgatgggaggcatccaactggctgcggggacaactgat
ctctttgatctggccattcagggaatcaaacttagctttgtggggtcgcttgtcttggca
tgtatggtggaccaagcatggcttgggtatctgactgggactggtccgaccaccatacca
aaagaaatcgagcgggggttcatgtcaatcatgtcggggttctcgccgacattcgccggc
acatcagtatcatcttcgtcaggcgaatttctcggggcggtgataagcgatctgtttacg
tccatcaaaattatgatgggactttcgttctgggaccgcggcctttctaatcctttgaca
atcgtttcatcgtttataacccttattccgacgattttgttgtgggtgttttctgtgatc
gctttctgtattgctggtgcacttatcctgggagaagcctttgcaacagtaatcgcaatc
aagctcgcatttgcattcaccggcttactggtcccgtggttgctgtttcgcccgctccag
tttctttttgacgcgtggctaaaaacgttactcatcagcttcacggcattagtcattgcc
gcattgtttgtggctgggatggcgagctttggaacagctattcaagccgaattggctagg
attccgacgaccggattttttagtgggccgcaaattcaggccattatgagtcccgttttt
attggatcgcttattctgataacaatcgcaactaaagttaacagcatggctcaaacgctg
cttagcggcggtgcgctttctggaattggcattcatgctttcagccaggcgatgaaggcg
acgcagggagttacgtcggcacctggtggcgcggcggcaaaggcctctgggatgaccagc
gctggcgccaacatggcaaaatctgtcgcatccaagggtatgagcatgggtaagtctgcc
gcttccggcatcggcgcggttgcgggcgcggcaaaggccgcggccagcccaggactggga
tctgcaaaaaccgcctttgggaacgcaatgaagggcccaggcggttccgtaatggccggg
gcaaaggctgcattacccgggattcgctcggccggggcgggagtgatgcgcgcgacagca
tctggcgccaagtcggctgcggtgggcggtctccaagcagcggggggcggcatcaagtct
gcagcgcaatcgattgcaaatccagcatcctttggccagtctgcaacggcctcaatagcc
actaataaaggattggcgccaacaaaacaggaatcccaacaggcaacccgggctggaaat
agagcctttaacgaggctcttgcagagggtaagggattctcacatgctcagattgttggt
aaacgtgcagtttcgggatctctagtaaccgccagtaaagcgccttcgaccccgaaatct
gccggtgcagcttcacccgcaacaccgcccacaccgactacacctgctcaatctgccggt
agatttcgcccacttcgcccaaccaagaagggaaacccatag

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