KEGG   Rathayibacter festucae: C1I64_00600
Entry
C1I64_00600       CDS       T06173                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rfs  Rathayibacter festucae
Brite
KEGG Orthology (KO) [BR:rfs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rfs03400]
    C1I64_00600
Enzymes [BR:rfs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     C1I64_00600
    5.6.2.6  RNA 3'-5' helicase
     C1I64_00600
DNA repair and recombination proteins [BR:rfs03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    C1I64_00600
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_3rd_Lhr WHD_2nd_Lhr WHD_4th_Lhr DEAD Helicase_C ResIII DUF6406 AAA_25 Cas3-like_C_2 AAA_22 PhoH
Other DBs
NCBI-ProteinID: AZZ50702
UniProt: A0A3Q9UUA4
LinkDB
Position
complement(122035..126717)
AA seq 1560 aa
MPHVLDRFSPATRAWFEGAFPAPTAAQEGAWSAISSGAHALVVAPTGSGKTLSAFLWAID
RLVQGPPPEDPQHRTRVLYVSPLKALGVDVERNLRSPLVGVTQTALRLSAEGIGSAPSTV
TVGVRSGDTPAAERRVLQKTPPDILITTPESLYLMLTSAARESLRGVETVIVDEVHAVAS
TKRGAHLAVSLERLDALLPKPVQRIGLSATVRPREEVARFLAGRSPVTIVAPVSEKQWDL
SVVVPVEDMSELGSTASQDGSTMGATGPQSGSIWPHVEESIVDRVLAHTSSIVFANSRRL
AERLTARLNEIYAERREAEAERAREAGEPVAVGALLGEAVGASARRTPAATMGAAGATSG
TGQAAPEDEPLLARAHHGSVSKEQRAIIEDDLKSGRLRCVVATSSLELGIDMGAVDLVVQ
VETPPSVASALQRVGRAGHQVGEVSRGSFYPKHRADLLHSAVTTERMRAGLIEAIMVPAN
PLDILAQQTVAATALESLDVDEWFDTVRRSAPFVALPRSAYEATLDLLSGRYPSDQFAEL
RPRVVWDRDENTLTGRPGAQRLAVTSGGTIPDRGLFGVFMVGEPGSTGNRVGELDEEMVY
ESRVGDVFALGATSWRIQEITYDRVIVTPAFGEPGRLPFWKGDSQGRPAELGEAIGAFTR
EIGGAAVETARERCTAAGLDEYATNNLLSFLDEQRLATGRIPDDRTLVLERFRDELGDWR
LVLHSPYGMQVHSPWALAIGARVRERHGVDGAAMAGDDGIVVRIPDTESEPPGAELFLFD
RDELEQLVTSEVGGSALFAARFRECAARALLLPRYNPGKRSPLWQQRQRAAQLLDVARTY
PTFPIILETVRECLQDVYDLPALLRLAARLDGRELQILEVETPTASPFARSMLFGYVAAF
MYEGDSPLAERRAAALSVDATLLGELLGRAELRELLDPLVLAQIERELQRVEPERRLRGL
EGAADLLRLLGPLTTDELGERLVDESVTSADVAKAAPIARETLDAIVAELVRAKRVLPVG
LAGEQRYAAMEDASRLRDALGVPLPIGVPVAFIDPVRDPLGDLVARYARTHGPFTAVAVA
ERLGLGVAVVNDTLRRLSGERRVSEGEFRPNGTGSEWCDSEVLRRLRSRSLAALRKEVEP
VDAAAYGRFLPAWQHLGGSLRGIDGVASVIDQLAGAPIPASAWESLILPARVRDYSPAML
DELTATGEVLWAGAGTLPGNDGWVSLHLADTAGLTLPVPAAEAVPLGELQQEIVGVLGSG
GGYFFRQLSDAVGSTDDKTLVEALWELVWAGLLTNDTLAPLRTLVGSTGGAHRQPRAPAR
ARAPRGRMTARPTMATRVGPPTAGGRWSIVPLAESDATIRGHALGETLLERYGIVTRGSV
QAEGVLGGFALAYKVLSGFEQQGRARRGYFIEKLGAAQFGTAGSVDRLRTFAPQDEAQQR
ARPVFALAATDPANPFGAALPWPQGEGHRPGRKAGALVAVVDGELAVYLERGGKTALTFS
SDETVLADAAGALAQLVRSRGVEKLTVEKIDGVFALGTPFGDALTAAGFVANPRGLRLRA
NT seq 4683 nt   +upstreamnt  +downstreamnt
atgccgcacgtcctcgatcgcttcagccccgccacccgggcctggttcgagggcgccttc
cccgcgccgacggccgcccaggagggcgcgtggtcggcgatctcgagcggcgcgcacgcc
ctcgtcgtcgctccgaccggctcgggcaagacgctctcggcgttcctctgggcgatcgac
cggctcgtgcagggcccgccgccggaggacccgcagcaccgaacccgcgtgctctacgtc
tcgccgctgaaggcgctcggcgtcgacgtcgagcgcaacctccgctcgccgctggtcggc
gtgacgcagaccgcgctccggctgagcgccgagggcatcggcagcgcgccgtcgacggtg
acggtgggcgtccgctccggcgacacccccgcggccgagcgccgggtgctccagaagacg
ccgccggacatcctgatcaccacccccgagtcgctctacctgatgctcacctcggccgcg
cgggagtcgctgcgcggggtcgagacggtcatcgtcgacgaggtgcacgcggtcgcctcc
accaagcgcggcgcgcacctcgcggtctcgctcgagcggctggacgcgctgctgcccaag
cccgtgcagcgcatcgggctctcggccacggtccgtccgcgcgaggaggtcgcgcgcttc
ctggccggccgctcgcccgtcacgatcgtcgccccggtctccgagaagcagtgggacctc
agcgtcgtcgtccccgtcgaggacatgtccgagctcggctccaccgcctcgcaggacggc
tcgacgatgggcgccaccggcccgcagagcggctcgatctggccgcacgtggaggagtcg
atcgtcgaccgcgtgctcgcgcacacctcctcgatcgtcttcgcgaactcgcggcggctg
gccgagcgactgacggcccggctcaacgagatctacgcggagcggcgcgaggccgaggcc
gagcgcgcccgcgaggccggcgagccggtcgcggtcggcgcgctcctcggtgaggcggtc
ggcgcctccgcccgccgcactccggccgccaccatgggcgccgccggagcgaccagcgga
accggtcaggccgctcccgaggacgagccgctgctcgcccgcgcgcaccacggctcggtc
agcaaggagcagcgcgcgatcatcgaggacgacctcaagtcgggccggctgcgctgcgtg
gtcgccacctcgagcctcgagctcgggatcgacatgggcgccgtcgacctcgtcgtgcag
gtcgagacgccgccctcggtcgccagcgcgcttcagcgcgtcggccgggccggccaccag
gtgggcgaggtctcccgcggctcgttctatcccaagcaccgggccgacctgctgcactcc
gccgtcaccaccgagcggatgcgcgccggcctgatcgaggcgatcatggtgccggccaac
cctctcgacatcctcgcgcagcagacggtcgccgccacggcactggagtcgctcgacgtc
gacgagtggttcgacaccgtccgccgcagcgcccccttcgtcgccctgccgcgctcggcc
tacgaggcgacgctcgacctgctctccggccgctacccctccgaccagttcgcggagctg
cggccccgcgtcgtctgggaccgcgacgagaacaccctcacgggccggcccggagcgcag
cgcctcgcggtgaccagcggcgggacgatccccgaccgcgggctgttcggcgtcttcatg
gtcggcgagcccggctcgaccggcaaccgggtcggcgagctcgacgaggagatggtctac
gagtcgcgcgtcggcgacgtcttcgcgctcggcgcgaccagctggcggatccaggagatc
acctacgaccgcgtcatcgtcacgcccgccttcggcgagccgggacgcctgccgttctgg
aagggcgactcgcagggccggccggccgagctcggcgaggcgatcggcgccttcacccgc
gagatcggcggcgccgcggtcgagaccgcccgcgagcgctgcaccgccgcgggcctggac
gagtacgcgaccaacaacctgctctccttcctcgacgagcagcgcctggccaccggccgc
atcccggacgaccgcacgctcgtgctcgagcgcttccgcgacgagctgggcgactggcgg
ctggtgctgcactcgccctacgggatgcaggtgcactccccctgggccctcgccatcggc
gcgcgggtccgcgagcggcacggggtcgacggcgccgcgatggcgggcgacgacggcatc
gtcgtccggatccccgacaccgagtcggagccgcccggtgccgagctcttcctcttcgac
cgcgacgagctcgagcagctggtgaccagcgaggtcggcggctcggcgctcttcgccgcc
cggttccgcgagtgcgcggcgcgggcgctgctgctgccccgctacaacccgggcaagcgc
tcgccgctctggcagcagcgccagcgcgccgcccagctgctcgacgtggcccgcacctac
ccgaccttcccgatcatcctcgagacggtgcgcgagtgcctccaggacgtctacgacctg
cccgcgctgctgcgcctcgccgcgcggctcgacggccgggagctgcagatcctcgaggtc
gagacgccgacggccagcccgttcgcccgctcgatgctgttcggctacgtcgccgccttc
atgtacgagggcgacagcccgctcgcggagcgccgcgccgccgctctctcggtcgacgcg
acgctcctcggcgagctgctgggccgcgccgagctgcgcgagctgctcgacccgctcgtc
ctcgcgcagatcgagcgcgagctgcagcgcgtcgagccggagcggcgcctgcgcggcctc
gagggcgccgcggacctgctccgcctgctcggcccgctgacgaccgacgagctcggtgag
cggctcgtcgacgagtcggtgacgtcggccgacgtcgctaaggccgcgccgatcgcgcgc
gagacgctcgacgcgatcgtcgccgagctggtccgcgccaagcgcgtcctgccggtcggc
ctcgcgggcgagcagcgctacgccgcgatggaggacgcctcgcgcctgcgcgacgccctc
ggcgtgccgctgcccatcggcgtccccgtcgccttcatcgacccggtgcgcgacccgctc
ggcgacctcgtcgcccgctacgcccgcacccacggcccgttcaccgccgtcgcggtcgcc
gagcggctcgggctcggtgtcgcggtcgtcaacgacaccctccgccggctctccggcgag
cgacgcgtctccgagggcgagttccgcccgaacggcaccggctcggagtggtgcgacagc
gaggtgctgcggcgcctgcgcagccgctcgctcgccgcgctccgcaaggaggtcgagccg
gtcgacgccgccgcctacggccgattcctgccggcctggcagcacctcggcggctcgctg
cgcggcatcgacggcgtcgcctccgtcatcgaccagctcgcgggtgcgcccatccccgcc
tcggcctgggagtcgctgatcctccccgcccgggtgcgcgactactcgcccgccatgctc
gacgagctgaccgcgaccggcgaggtcctctgggccggcgccggcaccctccccggcaac
gacggctgggtgagcctgcacctcgccgacaccgccggtctcacgctgcccgtccccgcg
gcggaggcggtgccgctcggcgagctgcagcaggagatcgtcggcgtgctcggctccggc
ggcggctacttcttccggcagctctccgacgcggtcggctccaccgacgacaagaccctg
gtcgaggcgctgtgggagctggtctgggcgggcctgctcacgaacgacacgctcgctccg
ctgcgcaccctcgtcggctcgaccggcggcgcgcaccggcagccgcgcgcccccgcccgc
gccagggcgccccgcggccgcatgaccgcccggcccacgatggcgacccgcgtcggtccg
cccacggcgggcggccgctggtcgatcgtgccgctggccgagtcggacgcgacgatccgc
ggtcacgccctcggcgagacgctgctcgagcgctacggcatcgtcacccgcggctcggtc
caggccgagggggtgctcggcggcttcgcgctcgcctacaaggtgctcagcggcttcgag
cagcagggccgcgcccgccgcggctacttcatcgagaagctcggcgccgcgcagttcggc
acggcgggcagcgtcgaccgtctccgtaccttcgcgccgcaggacgaggcccagcagcgc
gcccggcccgtcttcgcgctggccgcgaccgacccggcgaaccccttcggcgcggcactg
ccgtggccgcagggcgagggccaccggcccggtcgcaaggcgggcgctctggtcgccgtc
gtcgacggcgagctcgccgtctacctcgagcgcggcggcaagacggcgctcaccttctcc
tccgacgagaccgtcctcgcggacgcggccggcgcgctcgcgcagctggtccgctcccgc
ggggtcgagaagctcaccgtcgagaagatcgacggcgtcttcgccctgggcacgcccttc
ggcgacgccctgaccgccgccgggttcgtcgcgaacccacgcggcctgaggctgcgcgcg
tga

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