Rathayibacter festucae: C1I64_01165
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Entry
C1I64_01165 CDS
T06173
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rfs
Rathayibacter festucae
Pathway
rfs03420
Nucleotide excision repair
rfs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C1I64_01165
03430 Mismatch repair
C1I64_01165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfs03400
]
C1I64_01165
Enzymes [BR:
rfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1I64_01165
DNA repair and recombination proteins [BR:
rfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1I64_01165
MMR (mismatch excision repair)
Other MMR factors
C1I64_01165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
Metal_resist
AAA_11
ResIII
DEAD
Hydro_N_hd
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AZZ50805
UniProt:
A0A3Q9UQ35
LinkDB
All DBs
Position
228475..230934
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AA seq
819 aa
AA seq
DB search
MSLLFDPSDSRATPVIVGAPGGPSGDSARTDPEHERLVAGLNPQQREAVEYRGDALLIVA
GAGSGKTSVLTRRIASLLGSGEAWPSQILAITFTNKAAAEMRERVEKIVGQAAEGMWIST
FHSACVRILRREAENFGMTSSFTIYDSGDQRALLKRIVKDLEADSLGITVASASSKISKL
KNELADVDSYARTANMSDPNEEMFLQVFRAYSRALESANAFDFDDLIAQTVYLFRAFPHV
AAKYQRRFRHVMVDEYQDTNHAQYSLIHELTRAVPPATIAAAAFDRPYRGPVTADGSIPG
ASLTVVGDSDQSIYAFRGADIRNIVEFERDFPGCRVILLEQNYRSTQNILSAANAVISNN
FDRRAKNLWSASGEGEKIIGYTGYSGHDEAQFVVDEIARIHAAGTGYDEIAVFYRTNAQT
RALEEIFIRSALPYRILGGTKFYERAEIKDALAYLITVANPADVLALRRIMNTPKRGIGP
ATEAQLQSFADTNAVTLREAMRNAGSLGMGPKVTKAIVDLATLLDECALMLDPGRPEGEA
KVHEVLSALLSRSGYIDMLRASRDPQDEARAENVDELIAVTKEFARNNPDGGLVDFLTEV
SLVAAADDLDDDSGTVSLMTLHTAKGLEYDAVFLTGIEEDLLPHRISANEPGGPAEERRL
FYVGITRARKRLYLSLAMTRAQYGETSVAMPSRFLQEIPAELIEWRQSPGAATSRGGTQP
RALNAQRPGFGRSKSNTEFRQALAAAPKAKGEFPNRITGMVRDNGDLELIAGDRIRHTDF
GEGRVNAVTGEGSKRVAHVLFDQVGAKKLLIKVAPIEKI
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcctcttcgatccgagcgattcccgcgccaccccggtcatcgtcggcgcgccc
ggcgggccctccggcgactccgcgcgcaccgaccccgagcacgagcgcctcgtcgcgggg
ctcaacccgcagcagcgcgaggcggtcgagtaccgcggtgacgcgctgctcatcgtcgcg
ggcgccgggtcgggcaagaccagcgtgctgacgcggcgcatcgcgagcctgctcggcagc
ggcgaggcctggcccagccagatcctcgcgatcaccttcaccaacaaggccgccgccgag
atgcgcgagcgcgtcgagaagatcgtcggccaggccgccgaggggatgtggatctcgacg
ttccactccgcctgcgtgcggatcctgcggcgcgaggccgagaacttcgggatgacctcc
tcgttcaccatctacgactcgggcgaccagcgggcgctgctcaagcggatcgtgaaggac
ctcgaggcggactcgctcggcatcacggtcgcgagcgcctcctcgaagatctcgaagctc
aagaacgagctcgccgacgtcgactcctacgcgcggaccgcgaacatgagcgacccgaac
gaggagatgttcctccaggtcttccgcgcctactcgcgcgcgctcgagagcgcgaacgcc
ttcgacttcgacgacctgatcgcgcagacggtctacctcttccgcgccttcccgcacgtc
gcggcgaagtaccagcgccgcttccggcacgtgatggtcgacgagtaccaggacacgaac
cacgcgcagtactcgctgatccacgagctgacccgggccgtgccgccggccacgatcgcg
gcggccgccttcgaccggccctaccggggcccggtgacggccgacggatcgatccccggg
gcctcgctcacggtcgtcggcgactccgaccagtcgatctacgcgttccgcggagcggac
atccgcaacatcgtcgagttcgagcgcgacttcccgggctgccgggtgatcctgctcgag
cagaactaccgctccacccagaacatcctctcggccgcgaacgccgtcatctcgaacaac
ttcgaccgccgcgcgaagaacctctggtcggccagcggcgagggcgagaagatcatcggc
tacaccgggtactccggccacgacgaggcgcagttcgtcgtcgacgagatcgcccggatc
cacgcggccggcaccggctacgacgagatcgcggtgttctaccgcaccaacgcgcagacc
cgcgcgctggaggagatcttcatccgctcggcgctgccctaccggatcctcggcggcacc
aagttctacgagcgcgccgagatcaaggacgcgctcgcctacctgatcaccgtcgccaac
ccggcggacgtgctggcgctgcggcggatcatgaacacgcccaagcgcggcatcggcccg
gcgaccgaggcgcagctgcagtccttcgcggacaccaacgcggtgacgctgcgcgaggcg
atgcggaacgccgggtcgctcggcatgggcccgaaggtgacgaaggcgatcgtcgacctc
gcgacgctcctcgacgagtgcgcgctgatgctcgacccggggcggcccgagggcgaggcg
aaggtgcacgaggtgctgtcggcgctgctctcccgcagcgggtacatcgacatgctccgc
gccagccgcgacccgcaggacgaggcgcgcgccgagaacgtcgacgagctgatcgccgtg
acgaaggagttcgcgcgcaacaaccccgacggcggtctggtcgacttcctcaccgaggtg
tcgctggtcgccgcggcggacgacctcgacgacgactcggggaccgtgtcgctgatgacc
ctgcacaccgcgaaggggctcgagtacgacgcggtgttcctcaccggcatcgaggaggac
ctgctcccgcaccgcatctcggcgaacgagccgggcggcccggcggaggagcggcggctg
ttctacgtgggcatcacccgcgcgcgcaagcggctctacctctcgctcgcgatgacccgg
gcgcagtacggcgagacctcggtcgcgatgccgagccggttcctccaggagatcccggcc
gagctgatcgagtggcggcagtcgccgggggcggcgacctcgcgcggcggcacgcagccg
cgggcgctgaacgcgcagcgtcccggcttcggccgctcgaagtcgaacaccgagttccgc
caggcgctcgccgcggcgccgaaggcgaagggcgagttccccaaccggatcaccgggatg
gtgcgcgacaacggcgacctcgagctgatcgcgggcgaccgcatccggcacaccgacttc
ggcgagggccgcgtgaacgcggtcaccggcgagggcagcaagcgggtcgcgcacgtgctc
ttcgaccaggtcggcgccaagaagctgctgatcaaggtcgcgcccatcgagaagatctga
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