Rathayibacter festucae: C1I64_01580
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Entry
C1I64_01580 CDS
T06173
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rfs
Rathayibacter festucae
Pathway
rfs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1I64_01580 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfs03019
]
C1I64_01580 (groL)
03110 Chaperones and folding catalysts [BR:
rfs03110
]
C1I64_01580 (groL)
03029 Mitochondrial biogenesis [BR:
rfs03029
]
C1I64_01580 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rfs04147
]
C1I64_01580 (groL)
Enzymes [BR:
rfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
C1I64_01580 (groL)
Messenger RNA biogenesis [BR:
rfs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
C1I64_01580 (groL)
Chaperones and folding catalysts [BR:
rfs03110
]
Heat shock proteins
HSP60 / Chaperonin
C1I64_01580 (groL)
Mitochondrial biogenesis [BR:
rfs03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
C1I64_01580 (groL)
Exosome [BR:
rfs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
C1I64_01580 (groL)
Exosomal proteins of other body fluids (saliva and urine)
C1I64_01580 (groL)
Exosomal proteins of breast cancer cells
C1I64_01580 (groL)
Exosomal proteins of colorectal cancer cells
C1I64_01580 (groL)
Exosomal proteins of bladder cancer cells
C1I64_01580 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
AZZ50870
UniProt:
A0A3T0SX14
LinkDB
All DBs
Position
314014..315636
Genome browser
AA seq
540 aa
AA seq
DB search
MAKIIAFDEEARRGLERGLNTLADAVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LDEPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGADPISLKKGIE
KAVKAVTAELVAGAKAIETKEEIAATASISAADPEIGAIIAEAIDKVGKEGVVTVEESNT
FGTELELTEGMRFDKGYLSQYFVTDPDRQEAVFEDPYILIVNSKVSNIKDLLPVVDKVIQ
AGKQLLIIAEDVDGEALATLVVNKIRGIFKSVAVKAPGFGDRRKAQLQDIAILTGGQVIS
EEVGLKLENVTLDLLGSARKVVITKDETTIVEGAGDAEAIAGRVAQIRGEIENTDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
GKLAFEKLELVGDEATGANIVKVAIDAPLKQIALNAGLEPGVVAAKVRELPTGHGLNAAT
GEYVDLIAAGIIDPVKVTRSALQNAASIAGLFLTTEAVVADKPERNPVAAGGDPTGGMDF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcattgcttttgacgaagaagcccgccgcggcctcgagcgtggactcaac
accctggccgatgcggtcaaggtgaccctcggcccgcgcggccgcaacgtcgtgctcgag
aagaagtggggagcccccaccatcacgaacgacggcgtctcgatcgccaaggagatcgag
ctcgacgagccgtacgagaagatcggcgccgagctcgtcaaggaggtcgccaagaagacc
gacgacgtcgccggcgacggcaccaccaccgcgaccgtcctcgcccaggcgctcgtccgc
gagggcctgcgcaacgtcgcggccggcgccgacccgatcagcctgaagaagggcatcgag
aaggccgtcaaggccgtcaccgccgagctcgtcgccggcgccaaggcgatcgagaccaag
gaagagatcgcggccacggcctccatctccgccgcggaccccgagatcggcgcgatcatc
gccgaggcgatcgacaaggtcggcaaggagggcgtcgtcaccgtcgaggagtcgaacacc
ttcggcaccgagctcgagctgaccgagggcatgcgcttcgacaagggctacctgtcgcag
tacttcgtcacggaccccgaccgccaggaggccgtgttcgaggacccgtacatcctgatc
gtcaactccaaggtctcgaacatcaaggacctcctccccgtcgtcgacaaggtgatccag
gcgggcaagcagctgctgatcatcgccgaggacgtcgacggcgaggcgctggcgaccctg
gtcgtcaacaagatccgcggcatcttcaagtcggtcgccgtcaaggccccgggcttcggc
gaccgtcgcaaggcgcagctccaggacatcgcgatcctcaccggtggccaggtcatctcc
gaggaggtcggcctcaagctcgagaacgtcaccctcgacctgctcggctcggcccgcaag
gtcgtcatcaccaaggacgagaccacgatcgtcgagggtgccggcgacgccgaggccatc
gccggtcgcgtcgcgcagatccgcggcgagatcgagaacaccgacagcgactacgaccgc
gagaagctccaggagcgtctcgcgaagctcgccggtggcgtcgcggtcatcaaggccgga
gctgcgaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgccgtccgcaac
gcgaaggccgccgtcgaggagggcatcgtcgccggtggtggcgtcgccctcatccaggcc
ggcaagctcgccttcgagaagctcgagctggtcggagacgaggcgaccggcgcgaacatc
gtcaaggtcgcaatcgacgcgccgctcaagcagatcgcgctgaacgccggtctcgagccg
ggcgtcgtcgccgccaaggtccgcgagctgcccaccggacacggcctcaacgccgcgacc
ggcgagtacgtcgacctgatcgccgccggcatcatcgacccggtcaaggtcacgcgctcc
gctctgcagaacgcggcctcgatcgccggtctgttcctcaccacggaggccgtcgtcgcc
gacaagcccgagcggaaccccgtcgccgcaggcggagaccccacgggtggcatggacttc
tag
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