Rathayibacter festucae: C1I64_01950
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Entry
C1I64_01950 CDS
T06173
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rfs
Rathayibacter festucae
Pathway
rfs00061
Fatty acid biosynthesis
rfs00071
Fatty acid degradation
rfs01100
Metabolic pathways
rfs01212
Fatty acid metabolism
rfs02024
Quorum sensing
rfs04146
Peroxisome
Module
rfs_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rfs00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
C1I64_01950
00071 Fatty acid degradation
C1I64_01950
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
C1I64_01950
09145 Cellular community - prokaryotes
02024 Quorum sensing
C1I64_01950
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rfs01004
]
C1I64_01950
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rfs04147
]
C1I64_01950
Enzymes [BR:
rfs01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
C1I64_01950
Lipid biosynthesis proteins [BR:
rfs01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
C1I64_01950
Exosome [BR:
rfs04147
]
Exosomal proteins
Exosomal proteins of breast milk
C1I64_01950
Exosomal proteins of breast cancer cells
C1I64_01950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AZZ54108
UniProt:
A0A3Q9V1D5
LinkDB
All DBs
Position
complement(390237..391910)
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AA seq
557 aa
AA seq
DB search
MKPWLTSYAEGVPAEIDPPTQTLVDLLEDSVARYKRGIALEFFGAETSYAELGEKVARAA
EGLRRLGVRAGDRVALVLPNCPEHVIAFYAVLRLGAIVVEHNPLYTPRELRRQFEDHGAR
VAVVWNKTADVIAALPADLGVERVVSVDLTASFPLGKRLALRLPLAKAREARAKLTTSPR
TRSLIPFDRLLSGRRIARSHPRPALADTALLQYTSGTTGTPKGAILSHANLRANALQGQA
WVPGLREGDETFYAVLPLFHAYGLTLCLTFAISIGAKVVLFPTFDVGLVKAAAKKSPPTF
LPAVPPVYDALARASERGELGLRGIRFAISGAMSLPVATVDRWERASRGLLVEGYGMTES
SPVALGNPVGPSRRPGTVGVPFPSTRIRLVDPADPSVDRGPGESGELLLQGPQVFQGYWK
RPEDTAATLLPDGWLRTGDIATVSADGFVTIVDRAKELIITGGFNVSPSEVEGVLESHPD
VVRAAVVGLPRAEGGESVAAAVVLRAGTVVEAEALRDFCRLHLTAYKVPKRVVTVDALPT
SLIGKVLRREVRETLLG
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgtggctgacctcctacgcggagggcgtcccggccgagatcgacccgcccacg
cagaccctcgtcgatctgctcgaggactcggtggcccgctacaagcgcggcatcgcgctc
gagttcttcggcgccgagacgagctacgccgagctcggcgagaaggtcgcccgggccgcg
gaggggctgcgccgcctcggcgtgcgcgccggcgaccgcgtcgccctggtgctgccgaac
tgccccgagcacgtgatcgcgttctacgcggtgctgcggctcggcgcgatcgtcgtcgag
cacaacccgctctacaccccgcgcgagctgcgccggcagttcgaggaccacggcgcccgc
gtcgcggtggtctggaacaagacggccgacgtcatcgccgcgctgcccgccgacctcggc
gtcgagcgcgtcgtctcggtcgacctcaccgcgtccttcccgctcggcaagcggctcgcg
ctgaggctgcccctggcgaaggcccgggaggcgcgcgccaagctgaccacgagcccgcgc
acccgctcgctgatccccttcgaccgcctcctcagcggacgccggatcgcccgctcgcac
ccgcgcccggcactcgccgacaccgccctgctccagtacacgagcggcaccaccggcacg
ccgaagggcgcgatcctctcccacgccaacctccgcgcgaacgcgctgcagggccaggcc
tgggtgcccgggctgcgcgagggcgacgagaccttctacgccgtcctccccctcttccac
gcctacggcctcacgctctgcctgacgttcgcgatcagcatcggcgccaaggtcgtgctc
ttcccgaccttcgacgtcggcctggtgaaggccgccgcgaagaagtcaccgcccaccttc
ctgcccgccgtgccgccggtctacgacgcgctggcccgcgcctccgagcgcggcgagctc
ggtctgcgcggcatccgcttcgcgatctcgggagcgatgagcctgcccgtcgcgaccgtc
gaccgctgggagcgcgcgagccgcggactcctcgtcgagggctacgggatgaccgagagc
tcgccggtcgcgctcggcaacccggtcggccccagccgccggccgggcaccgtcggcgtg
ccgttcccgagcacccggatccgcctggtcgaccccgccgacccctccgtcgaccgcgga
cccggcgagtccggcgagctgctgctgcagggaccgcaggtgttccagggctactggaag
cgccccgaggacaccgcggcgacgctgctgcccgacggctggctccgcaccggcgacatc
gccaccgtctcggcggacggcttcgtcacgatcgtcgaccgggcgaaggagctgatcatc
accggcggcttcaacgtctcgccctccgaggtggagggcgtgctcgagtcgcacccggac
gtcgtgcgcgccgcggtcgtcggcctgccccgcgcggagggcggcgagagcgtcgccgcc
gccgtcgtgctgcgtgccgggacggtcgtcgaggccgaggcgctgcgcgacttctgccgc
ctgcacctgacggcctacaaggtgccgaagcgggtggtgacggtcgacgcgctgccgacc
tcgctgatcggcaaggtgctgcgccgcgaggtgcgcgagacgctgctgggctga
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