Rathayibacter festucae: C1I64_03205
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Entry
C1I64_03205 CDS
T06173
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
rfs
Rathayibacter festucae
Pathway
rfs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1I64_03205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfs03021
]
C1I64_03205
03019 Messenger RNA biogenesis [BR:
rfs03019
]
C1I64_03205
Transcription machinery [BR:
rfs03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
C1I64_03205
Messenger RNA biogenesis [BR:
rfs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C1I64_03205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
AAA_22
NACHT
VWA_2
Glyco_tranf_2_3
Motif
Other DBs
NCBI-ProteinID:
AZZ51146
UniProt:
A0A3T0SXK3
LinkDB
All DBs
Position
676416..678920
Genome browser
AA seq
834 aa
AA seq
DB search
MCSPGERSLPGGRNPSPVTDVNTRGTAADTNADLIGLRVAELQALATSLGIGGASKLRKG
ELVSAISDLRAGADSEGAEPAAPAEEQAPAEPSVAEQSFAEPAEAEPVVDGTSVEAEPAD
VAEQSAPALETPVESTAPAESTEADTADVLEQAATTVEEPAPAAAEAAPVELELPVAAEP
VAEPAAERAPRRRGSRRASSGTVAAGEHLNVPAGSGVESLIPELPPVLEQAPDAEQAPRP
VIEIELPNGPESDDSSREGGQRERRGRRRSRGGSAEQSEQPETTDAVESSAQDAGDEPDS
GDRQDDQQNSGDQQNDGQQNGGDQQGTGRGRNRRNRNRRGEDRQANDGQQNGQGGSAQSN
GGQSNGQNGGGQNGAAQNGNGQAPSNQGGNQGNQGGQPQGGNGQNAQGSAQNGQQADGED
GRRSRYRDRKRRGGAVGDDFEPEISEDDVLIPVAGILDVLDNYAFVRTTGYLPGVSDVYV
SLGQVKKYNLRKGDAVVGAIRQPREGEGGGRQKYNAIVRVDSINGQTVDEAAARVEFHDL
TPLYPTERLRLETEPGKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVLQQIANAIVQNN
PEVHLMVVLVDERPEEVTDMQRTVRGEVVASTFDRPAEDHTTVAELAIERAKRLVELGHD
VVVLLDSITRLGRAYNVTAAPSGRVLSGGVDASALYPPKKFFGAARNIENGGSLTILATA
LIETGSKMDEVIFEEFKGTGNMELRLSRHLADKRIFPAVDVNASGTRREEMLLSSDEVKI
TWKLRRALAGLDQQQALEIILSRLKETSSNVEFLMQVSKSAVGPTTGNHGNGHH
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtgctctcccggtgagcgatcgctcccggggggaaggaacccctctccagtgacagat
gtcaacacccgcggtaccgccgcggacaccaacgccgatctcatcggcctccgcgtcgcg
gagctccaggccctcgcgacgagcctcggcatcggcggagcctccaagctccgcaagggc
gagctcgtctcggccatctcggacctccgcgccggtgcggactccgagggcgccgagccc
gccgctcccgccgaggagcaggcgcccgccgagccctcggtcgccgagcagtccttcgcc
gagccggccgaggccgagcccgtcgtggacggcacgagcgtcgaggcagagcccgccgac
gtcgccgagcagagcgccccggcgctcgagacgcccgtcgagtcgaccgcgcccgccgag
agcacggaggcggacaccgccgacgtcctcgagcaggccgccaccacggtcgaggagccg
gcgcccgccgccgccgaggccgccccggtcgagctcgagctccccgtcgccgccgagccg
gtggccgagcccgccgccgagcgcgcgccccgtcgccgcggctcgcgtcgcgcctccagt
ggcaccgtcgccgccggcgagcacctgaacgtgccggccggcagcggcgtcgagtcgctc
atccccgagctcccgcccgtcctcgagcaggcccccgacgccgagcaggcgccgcgtccg
gtcatcgagatcgagctgcccaacgggccggagtcggacgactcctcccgcgagggcggt
cagcgcgagcgtcgcggacgccgtcgcagccgcggcggcagcgccgagcagagcgagcag
cccgagaccaccgacgccgtcgagtcctccgcgcaggacgccggcgacgagccggactcc
ggcgaccgccaggacgaccagcagaactccggcgaccagcagaacgacggccagcagaac
ggcggcgaccagcagggcaccggccgcggccgcaaccgccgcaaccgcaaccgccgcggc
gaggaccgccaggcgaacgacggccagcagaacggccagggcggcagcgcccagagcaac
ggcggccagagcaacggccagaacggcggcggccagaacggcgccgcgcagaacggcaac
ggccaggcgccgtccaaccagggcggcaaccagggcaaccagggtggccagccgcagggc
ggcaacggccagaacgcccagggctccgcgcagaacggccagcaggccgacggcgaggac
ggccgccgcagccgctaccgcgaccgcaagcgccgcgggggagcggtcggcgacgacttc
gagcccgagatcagcgaggacgacgtcctcatcccggtcgccggcatcctcgacgtcctc
gacaactacgccttcgtgcgcaccacgggctacctgcccggtgtcagcgacgtctacgtc
tcgctcggccaggtcaagaagtacaacctgcgcaagggcgacgccgtcgtcggcgcgatc
cgccagccccgcgagggcgagggcggcggccgccagaagtacaacgcgatcgtccgcgtc
gactcgatcaacggccagaccgtcgacgaggccgccgcgcgcgtcgagttccacgatctc
acgccgctgtacccgaccgagcgcctgcgcctcgagacggagccgggcaagctgacccag
cggatcatcgacctggtcgccccgatcggcaagggccagcgcggcctcatcgtcgcgccg
cccaaggcgggcaagacgatcgtcctgcagcagatcgccaacgcgatcgtgcagaacaac
cccgaggtccacctcatggtcgtgctcgtcgatgagcgtcccgaggaggtcaccgacatg
cagcgcaccgtgcgcggcgaggtcgtcgcctccacgttcgaccgcccggccgaggaccac
accacggtcgccgagctcgcgatcgagcgcgccaagcgcctcgtcgagctgggccacgac
gtcgtcgtgctgctcgactcgatcacccgcctcggccgcgcctacaacgtgaccgccgct
ccctcgggccgcgtgctctcgggtggcgtcgatgcgtcggcgctgtacccgccgaagaag
ttcttcggagcggcgcgcaacatcgagaacggcggctcgctcaccatcctcgcgacggcg
ctcatcgagaccggctcgaagatggacgaggtgatcttcgaggagttcaagggcaccggc
aacatggagctccgtctctcgcgccacctcgccgacaagcggatcttccccgccgtcgac
gtgaacgcgtcgggcacccgccgcgaggagatgctcctcagctcggacgaggtcaagatc
acctggaagctgcgccgcgccctcgccgggctcgaccagcagcaggcgctcgagatcatc
ctgtcccgcctcaaggagacgtcctcgaacgtcgagttcctgatgcaggtctcgaagtcc
gccgtcggcccgaccaccgggaaccacggcaacggccaccactag
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