Rathayibacter festucae: C1I64_04365
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Entry
C1I64_04365 CDS
T06173
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rfs
Rathayibacter festucae
Pathway
rfs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C1I64_04365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfs03400
]
C1I64_04365
Enzymes [BR:
rfs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
C1I64_04365
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C1I64_04365
DNA repair and recombination proteins [BR:
rfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C1I64_04365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
DZR
DUF7573
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
AZZ51352
UniProt:
A0A3T0SYP0
LinkDB
All DBs
Position
931690..932604
Genome browser
AA seq
304 aa
AA seq
DB search
MPELPEVEVVRAGLAPAVTGSLVTSVEIVDERSLKRHVHPLGSFEGLLVGRRLRGAVRRG
KFLWLPAGRDEALLVHLGMSGQVLLQTADAALAKLTRIRIGIEHPEHGELALHFVDQRIF
GSMAIDSLAPTADGAPGGYAGDDAVDGDWLRAVPSQVAHIARDPLDPFFDLSAVLAVLAR
RNSGIKRSLLDQTLVSGIGNIYADESLWAAELHPETPSSTLTEARIRRLFAEVRSVLERA
LAEGGTSFDAQYVNVNGASGYFSHSLNAYGQTGKPCPRCGEPIVRVPFMNRSSHLCPHCQ
RPPR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgcccgaggtcgaggtggtgcgggccgggctcgctcccgccgtcaccggc
tcactggtgacgagcgtcgagatcgtcgacgagcgctcgctcaagcgccatgtgcacccg
ctcggctcgttcgaggggctgctcgtcgggcggcggctgcgcggcgcggtgcgacgcggc
aagttcctctggctgccggccggtcgcgacgaggcgctgctcgtgcacctcgggatgagc
gggcaggtgctgctgcagacggccgacgccgcgctcgcgaagctgacccgcatccggatc
ggcatcgagcatccggagcacggcgagctggccctgcacttcgtggaccagcggatcttc
ggctcgatggcgatcgactcgctggctcccaccgcggacggcgctcctggcggctacgcc
ggcgacgacgcggtcgacggcgactggctgcgggcagtgccctctcaggtcgcgcacatc
gcccgcgatccactcgacccgttcttcgacctctcggccgtcctcgccgtgctggcccgc
cggaacagcggcatcaagcgctccctgctcgatcagacgctggtcagcggcatcggcaac
atctacgcggacgaatcgctgtgggcggccgagctgcaccccgagacgccgagctcgacg
ctgaccgaggcgcggatccgccgcctgttcgccgaagtccgctcggtgctcgagcgcgcg
ctggccgagggcggcaccagcttcgacgcccagtacgtcaacgtgaacggcgcctccggc
tacttctcgcacagcctcaacgcctacgggcagaccggcaagccctgcccgcgctgcggc
gagccgatcgtgcgcgtgccgttcatgaaccgctcgtcgcacctctgcccgcactgccag
cggccgccgcgctga
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