Rathayibacter festucae: C1I64_05465
Help
Entry
C1I64_05465 CDS
T06173
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
rfs
Rathayibacter festucae
Pathway
rfs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1I64_05465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfs03019
]
C1I64_05465
03009 Ribosome biogenesis [BR:
rfs03009
]
C1I64_05465
Enzymes [BR:
rfs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
C1I64_05465
Messenger RNA biogenesis [BR:
rfs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C1I64_05465
Ribosome biogenesis [BR:
rfs03009
]
Prokaryotic type
rRNA processing factors
C1I64_05465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Pericardin_rpt
Motif
Other DBs
NCBI-ProteinID:
AZZ51543
UniProt:
A0A3T0SYX2
LinkDB
All DBs
Position
1155917..1158700
Genome browser
AA seq
927 aa
AA seq
DB search
MVEDNSTGGSEPDRDEPRSGARKISRLFGGRRTNRRAGSSASATGETIIDTNDAEQNGSD
TAAPDTAAQDTEQTTAPDASAEPGETEGPASTGAAFFTAGPESPADAEQSATEESAPRRP
PLPSTSLLFQAPILPDYVQLTPLPPRGAPLGVREERDEPEEEQGSVRRRSRRRSGESDRG
GSDDPENTVVRVRQPREQREPREAREPELITEPQRIKGSTRLEAKKQRRRDGRDAGRRRT
VVTESEFLARREAVDRVMVVRSKEDSIRIGVLEDGVLAEHYVARSQEASLIGNVYLGRVQ
NVLPSMEAAFVDIGRGRNAVLYSGEVDWDAANNAGGPRRIELALKPGDRVLVQVTKDPVG
HKGARLTSQISLPGRYLVYVPNGSMNGISRKLPDTERARLKKILKEVLPENVGVIVRTAA
EGATEEQLTVDVERLTAQWTALSTKAATGQAPALLHSEPDLLIKIVRDVFNEDFEKMVIA
GDDARETIELYLSQVAPDLLERVQVYSGEQDAFDEFRITEQIEKALERKVWLPSGGSLVI
DRTEAMTVVDVNTGKFVGSGGNLEETVTKNNLEAAEEIVRQLRLRDIGGIIVVDFIDMVL
ESNRDLVLRRLVECLSRDRTKHQVAEVTSLGLVQMTRKKLGLGLLETFSENCEVCAGRGV
IVQHDPVVKHRSTAAPQQERRRGGKPAGEQPSNGRSGSAGQNGYSAQNGAGAQNGSKPVS
THAITDDAKNALAQIAASTIHPAAVRHAAEEAVALVDEATTTAETQPAEQQADSSAEQSG
EQSAERQGESSGRRERPARGERRRRGRDREPRQETPESGEQQESAPAARETAQEPAAQEP
AAQPVAAEAPAAQAPVVPILDIPIPPAPVVTERRVPSAVAEHLLDSVLDALPAPKQPGQG
RAKSRRVTTAALTGIAVVPEQTPRRAQ
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggtggaagacaacagcacgggcggatccgaaccggaccgcgacgagccccgcagcggg
gccaggaagatcagtcgcctcttcggtggccgtcggacgaaccgacgggccggatcgagc
gcatcagcgacaggggaaacgatcatcgacacgaacgacgccgagcagaacgggtcggac
accgccgccccggacacggcagcccaggacaccgagcagaccaccgcgccggacgcgagc
gccgagcccggcgagacggaagggccggcctcgaccggcgccgccttcttcaccgccggc
ccggagtcgccggccgacgccgagcagtccgcgacggaggagtccgctccccgccgcccg
ccgctgccgagcacgtcgctgctcttccaggcgccgatcctgcccgactacgtccagctg
accccgctgccgccccgaggcgcgccgctcggcgtccgcgaggagcgcgacgagccggag
gaggagcagggctccgtccgccgccgctcgcgtcgccgcagcggcgagagcgaccgcggc
ggctccgacgaccccgagaacaccgtcgtccgggtccgtcagccgcgcgagcagcgcgag
ccccgcgaggcgcgcgagccggagctcatcaccgagccgcagcgcatcaagggctcgacc
cgcctggaggccaagaagcagcgccgccgcgacggccgcgacgccggccgacgccgcacg
gtcgtcaccgagtccgagttcctcgcccgccgggaggccgtcgaccgcgtcatggtcgtt
cgctccaaggaggacagcatccgcatcggcgtgctcgaggacggcgtcctcgccgagcac
tacgtcgcccgctcgcaggaggcgtcgctgatcggcaacgtctacctcggccgcgtgcag
aacgtcctgcccagcatggaggcggccttcgtcgacatcgggcgcggccgcaacgccgtg
ctctactccggcgaggtcgactgggacgccgcgaacaacgccggcggtccccgccgcatc
gagctcgcgctcaagcccggcgaccgcgtgctcgtccaggtcaccaaggacccggtcggc
cacaagggcgcgcgcctgaccagccagatctcgctgccgggccgctacctcgtctacgtg
cccaacggctcgatgaacggcatctcgcgcaagctcccggacacggagcgcgcgcgcctc
aagaagatcctcaaggaggtcctccccgagaacgtgggcgtcatcgtccgcacggccgcc
gagggcgccacggaggagcagctcacggtcgacgtcgagcgcctcaccgcgcagtggacc
gcgctcagcaccaaggccgcgaccggccaggcgccggcgctgctgcacagcgagcccgac
ctgctgatcaagatcgtccgcgacgtcttcaacgaggacttcgagaagatggtgatcgcc
ggcgacgacgcccgcgagaccatcgagctctacctcagccaggtcgcccccgacctgctc
gagcgagtgcaggtctactccggcgagcaggacgcgttcgacgagttccgcatcaccgag
cagatcgagaaggccctcgagcgcaaggtctggctgcccagcggcggctcgctcgtgatc
gaccgcaccgaggccatgacggtcgtcgacgtgaacaccggcaagttcgtcggctccggc
ggcaacctcgaggagacggtcaccaagaacaacctcgaggccgccgaggagatcgtccgc
cagctccggctgcgcgacatcggcggcatcatcgtcgtcgacttcatcgacatggtgctc
gagtccaaccgcgatctcgtgctccggcgcctggtcgagtgcctgagccgcgaccggacc
aagcaccaggtcgccgaggtcacctcgctcggcctcgtgcagatgacccgcaagaagctc
ggcctcggcctcctcgagaccttcagcgagaactgcgaggtctgcgcgggccgcggcgtc
atcgtccagcacgaccccgtggtcaagcaccgctcgaccgctgctccgcagcaggagcgc
cgccgcggcggcaagccggccggcgagcagccctcgaacggccgcagcggctcggccggt
cagaacggctacagcgcccagaacggcgccggcgcgcagaacggctccaagccggtcagc
acccacgccatcaccgacgacgccaagaacgcgctcgcgcagatcgccgcgagcacgatc
cacccggccgccgtccggcacgccgcggaggaggccgtcgccctcgtcgacgaggccacg
accaccgcggagacgcagccggccgagcagcaggccgactcgtccgccgagcagtcgggc
gagcagtccgcggagcgtcagggcgagtcgtccggccgccgcgagcgtcccgcccggggc
gagcgccgtcgccggggccgcgaccgcgagccgcgccaggagacgccggagtccggcgag
cagcaggagtccgctcccgccgcccgcgagacggcccaggagcccgcagcgcaggagccc
gcggctcagcccgtcgcggccgaggctcctgcggcccaggccccggtggtcccgatcctc
gacatcccgatcccgcccgctccggtcgtgaccgagcgccgggtgcccagcgccgtcgcc
gagcacctgctcgactccgtcctggacgcgctgcccgcacccaagcagcccggccagggc
cgcgccaagagccgtcgggtcaccacggcggcgctcaccgggatcgcggtcgtgcccgag
cagacgccgcgccgcgcgcagtag
DBGET
integrated database retrieval system
