Rathayibacter festucae: C1I64_05635
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Entry
C1I64_05635 CDS
T06173
Name
(GenBank) DNA topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rfs
Rathayibacter festucae
Brite
KEGG Orthology (KO) [BR:
rfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfs03032
]
C1I64_05635
03400 DNA repair and recombination proteins [BR:
rfs03400
]
C1I64_05635
Enzymes [BR:
rfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
C1I64_05635
DNA replication proteins [BR:
rfs03032
]
Prokaryotic type
DNA Topoisomerases
C1I64_05635
DNA repair and recombination proteins [BR:
rfs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C1I64_05635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
AZZ51575
UniProt:
A0A3T0SZ47
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Position
complement(1193216..1195684)
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AA seq
822 aa
AA seq
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MNAAPPPSGSSLTERIEDVDVSAEMEGSFLEYAYSVIYSRALPDARDGLKPVQRRILYMM
SEMGLRPDRGHVKSARVVGEVMGKLHPHGDASIYDSLVRLAQPFTLRVPLVDGHGNFGSL
DDGPAAARYTEARLAAAATAMTEHLDEDVVDFVPNYDNSHDQPEVLPAAFPNLLVNGASG
IAVGMATNMAPHNLIEVIGAARHLIAHPDASLDDLMSFVPGPDFPSGGTIVGLAGVRDAY
ATGRGSFKTRARVSVESITARKSGLVVTELPYLVGAEKVIDKIKDGVQNKKLSGIADVTD
LTDRDNGLRLVIGIKTGFSPEAVLEQLYRYTPLEDAFSINNVALVDGQPRTLGLKELLQV
YVGHRLTVVTRRSRYRLRKRQERLHLVEGLLIAILDIDEVIQLIRASDDTAAARARLIEV
FDLSTIQADYILELQLRRLTRFSRIELETERDTLLAEIAELEALLASRSRLEALVSDELD
DVAQRLGTPRRTLLTEARPSVATTGRKTAAVLEIADLPCRVLLSTTGRMVRIDRDPEAAP
HPERATRRSKHDAVLSTIDTTTRAEIGAVTTAGRLLRFSPVDVPSVPSSSVQLGAGVRMS
DYLSHLAKDERVLALVALDDPRPIALGTLQGTVKRVAPGDLPNRPDIELIALRPKDAVVG
AAPSADEDELVFVTGEAQLLRFSASAVRPQGRTAAGMAGVKISETDEVVSFAVVPESERD
ETVVATVAVDSWALTGTDTGSAKVSAFSEFPPKGRATGGVRAQRFLKGETALGVAWVGPG
PAHALEADGSVAALPDSGMKRDGSGVALAAPVASIGAAPEQF
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgcaccccctccctccggatcctccctgaccgagcgcatcgaggacgtcgac
gtctcggccgagatggaggggtcgttcctcgagtacgcctactcggtcatctactcccgc
gccctgcccgacgcccgcgacggcctgaagccggtgcagcgccgcatcctctacatgatg
agcgagatgggcctgcgccccgatcgcggccacgtgaagtcggcccgcgtcgtcggcgag
gtgatgggcaagctgcacccgcacggcgacgcctccatctacgactcgctcgtgcgcctc
gcgcagccgttcacgctccgggtcccgctcgtcgacggccacggcaacttcggctcgctc
gacgacggccccgccgccgcccgctacaccgaggcccgtctcgcggccgccgcgacggcg
atgaccgagcacctcgacgaggacgtcgtcgacttcgtccccaactacgacaactcgcac
gaccagcccgaggtgctccccgcggcgttcccgaacctcctcgtcaacggcgcgagcggc
atcgcggtcggcatggccaccaacatggccccgcacaacctgatcgaggtcatcggagcg
gcgcggcacctgatcgcgcaccccgacgcctcgctggacgacctgatgtcgttcgtcccc
ggcccggacttccccagcggcggcacgatcgtcgggctcgccggcgtccgcgacgcctat
gcgaccggccgcggcagcttcaagacccgcgctcgcgtctcggtcgagagcatcaccgcc
cggaagtccggcctggtcgtcaccgagctgccctacctcgtcggcgccgagaaggtcatc
gacaagatcaaggacggcgtccagaacaagaagctgagcgggatcgccgacgtcaccgat
ctcaccgaccgcgacaacggcctccgcctcgtgatcgggatcaagaccggcttcagcccg
gaggcggtgctcgagcagctgtaccgctacaccccgctcgaggacgccttctcgatcaac
aacgtcgccctcgtcgacggccagccccgcacgctcggcctcaaggagctgctgcaggtc
tacgtcgggcaccgcctgaccgtggtgacccgccgctcccgctaccgtctccgcaagcgc
caggagcggctgcacctggtcgagggactgctgatcgcgatcctcgacatcgacgaggtc
atccagctgatccgcgcgagcgacgacaccgccgccgcccgggcccggctgatcgaggtc
ttcgacctcagcacgatccaggccgactacatcctcgagctgcagctgcgccgcctgacg
aggttctcccggatcgagctcgagaccgagcgcgacaccctgctcgccgagatcgccgag
ctcgaggcgctgctggccagccgcagccgcctcgaggcactcgtgtccgacgagctcgac
gacgtcgcgcagcgtctcggcacgccgcgtcggacgctgctcaccgaggcgcgcccctcc
gtcgccacgaccggccggaagaccgccgccgtgctcgagatcgccgacctgccgtgccgg
gtgctgctgagcaccaccgggcggatggtgcgcatcgaccgcgacccggaggccgcgccg
caccccgagcgcgcgacccgccgcagcaagcacgacgcggtgctcagcacgatcgacacc
accacgcgcgccgagatcggcgcggtgacgaccgcgggccgcctgctgcgcttctccccc
gtcgacgtcccgtccgtcccgtcctcctcggtgcagctcggcgccggcgtccggatgagc
gactacctcagccacctggcgaaggacgagcgcgtcctcgccctggtcgccctcgacgac
ccccgcccgatcgccctgggcaccctgcagggcacggtcaagcgcgtcgccccgggcgac
ctgcccaaccgcccggacatcgagctgatcgcgctgcggccgaaggacgcggtcgtcgga
gccgcgccgtcggccgacgaggacgagctcgtcttcgtcaccggcgaggcccagctgctg
cgcttctccgcctcggcggtgcgcccgcagggccggaccgcggcgggcatggccggcgtc
aagatcagcgagaccgacgaggtcgtctcctttgcggtcgtccccgagtccgagcgcgac
gagacggtcgtcgcgaccgtcgccgtcgacagctgggccctcaccggcaccgacaccggc
agcgccaaggtgtcggcgttctcggagttcccgcccaagggccgcgcgaccggcggcgtc
cgcgcccagcgcttcctcaagggcgagaccgctctcggcgtcgcctgggtcggccccggc
ccggcgcacgcgctcgaggccgacggcagcgtcgcggcgctgcccgactccgggatgaag
cgcgacggctccggcgtcgccctcgcagccccggtcgccagcatcggcgcggctcccgag
cagttctag
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