Rathayibacter festucae: C1I64_08170
Help
Entry
C1I64_08170 CDS
T06173
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rfs
Rathayibacter festucae
Pathway
rfs03030
DNA replication
rfs03410
Base excision repair
rfs03420
Nucleotide excision repair
rfs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C1I64_08170
03410 Base excision repair
C1I64_08170
03420 Nucleotide excision repair
C1I64_08170
03440 Homologous recombination
C1I64_08170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfs03032
]
C1I64_08170
03400 DNA repair and recombination proteins [BR:
rfs03400
]
C1I64_08170
Enzymes [BR:
rfs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C1I64_08170
DNA replication proteins [BR:
rfs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C1I64_08170
DNA repair and recombination proteins [BR:
rfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
C1I64_08170
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1I64_08170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_P_Exo
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
AZZ52035
UniProt:
A0A3Q9UWC5
LinkDB
All DBs
Position
complement(1743477..1746146)
Genome browser
AA seq
889 aa
AA seq
DB search
MSDPEQPTLLLIDGHSLAFRAFYALPVDSFQTRDGQHTNAIHGFLSMLILLLKNEKPTHL
GVAFDISRYSFRTREYPEYKGTRGETPPEFKGQVPLLEEALHAMNIRTVSKEDFEADDIL
ATLARQGAEAGFRVLVVSGDRDTIQLVTPDVTLLYPSTQGVSQLTRYDRDKVFEKYGVEP
HQYPEIAALVGETSDNLPGVDKVGPKTAAKWVNQYGTVADIIAHADEIKGVVGEKLREQK
ENALRNRRLNRLITDVELPLGPNDLDRRPIDPDAVREIFSRLEFRTLQERVLTIAADEGV
EGAAEALAGDTVVTAAPAVRNLVDEELAHWLARVSADGTVPVAVQVQLGESGLEGVGLSV
EAESAFVPWAAGRPDYTALEEWLASDAPKYFADAKPQVKALRRAGLPVAGLAFDTRIAAW
LLQPTGHAATLPAQVQQYLDEAMIQGDPNQLVPTAPPIGPATEAWYAHRLVGVQTELLGE
GMLSVLVDIELPIVQVLATMELTGVAIDAEVLARLRGELTATSVDLANRAFAEIGHEMNL
GSPKQLQQVLFEELAMPRTRATKTGYTTDASALADLQESHPHPFLGLLLEHRDATKLKQI
IETLEKSVTADGRIHTSYDQTGTATGRISSNDPNLQNIPVRSEVGRRIRTAFVHGEQAST
LITADYSQIEMRIMAHLSGDAGLIEAFHSGEDLHRFVGARIFGVEPSDVTSAMRNKVKAM
SYGLAYGLSAFGLSKQLRISSNEAKQLMTDYFVRFGAVRDYLRTVVEQARETGYTETIFG
RRRPFPDLQSGNRVLRDNAERAALNSPIQGSAADIMKIAMIGVQADIGEKGLESRMLLQV
HDELIFDVAPGEEDVLEEVVRARMAGAVDLSVPLEVQVGHGSDWDVAAH
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagatccggaacagcctaccctcctgctcatcgacggtcattcgctcgcgttccgg
gcgttctacgccctcccggtcgacagcttccagacccgcgacgggcagcacacgaacgcc
atccacggcttcctgtcgatgctgatcctgctgctgaagaacgagaagcccacgcacctc
ggcgtcgccttcgacatctcccgctactcgttccgcacccgcgagtaccccgagtacaag
ggcacccgcggcgagaccccgcccgagttcaagggccaggtccccctcctcgaggaggcg
ctgcacgcgatgaacatccgcaccgtctcgaaggaggacttcgaggccgacgacatcctc
gccacgctcgcccgccagggcgccgaggcgggcttccgcgtgctggtcgtctcgggagac
cgcgacaccatccagctggtcacgcccgacgtcacgctgctctacccgtcgacccagggc
gtctcgcagctcacccgctacgaccgcgacaaggtcttcgagaagtacggcgtcgagccg
caccagtaccccgagatcgctgcgctcgtcggcgagacgagtgacaacctgcccggcgtc
gacaaggtcggccccaagacggccgcgaagtgggtcaaccagtacggcaccgtcgccgac
atcatcgcccacgccgacgagatcaagggcgtcgtcggcgagaagctgcgcgagcagaag
gagaacgcgctccgcaaccgccggctcaaccgcctgatcaccgacgtcgagctgccgctc
ggcccgaacgacctcgaccgccgtccgatcgacccggacgcggtccgcgagatcttcagc
cggctcgagttccggacgctgcaggagcgcgtgctcaccatcgccgccgacgagggcgtc
gagggcgcggcggaggcgctcgccggcgacaccgtcgtcaccgcggctccggccgtgcgc
aacctggtcgacgaggagctggcgcactggctcgcccgcgtctccgcggacggcaccgtg
cccgtcgccgtgcaggtgcagctcggcgagagcgggctcgagggcgtcggcctgtcggtc
gaggccgagtcggccttcgtgccctgggccgcgggccggcccgactacaccgcgctcgag
gagtggctcgcgagcgacgcccccaagtacttcgccgatgccaagccgcaggtcaaggcg
ctgcgccgggccgggctcccggtggccggactcgccttcgacacccgcatcgcggcgtgg
ctcctgcagcccaccggtcacgcggcgacgctgccggcccaggtccagcagtacctcgac
gaggcgatgatccagggtgacccgaaccagctcgtccccaccgccccgccgatcggcccc
gcgaccgaggcctggtacgcgcaccgcctggtcggcgtgcagaccgagctgctcggcgag
ggcatgctctcggtgctcgtcgacatcgagctgccgatcgtgcaggtgctcgcgacgatg
gagctcaccggtgtcgcgatcgacgccgaggtgctcgcgcgcctccgcggcgagctcacc
gcgacctccgtcgacctcgcgaaccgcgccttcgccgagatcgggcacgagatgaacctc
ggctcgcccaagcagctgcagcaggtcctgttcgaggagctggcgatgccgcgcacccgc
gcgacgaagaccggctacacgaccgacgcgtccgccctggccgacctgcaggagtcgcac
ccgcacccgttcctcggtctcctgctcgagcaccgcgacgcgaccaagctcaagcagatc
atcgagacgctggagaagtcggtcaccgccgacggccggatccacaccagctacgaccag
accggcaccgcgaccgggcggatctcctccaacgacccgaacctgcagaacatcccggtc
cgcagcgaggtcggccgccgcatccgcaccgcgttcgtgcacggcgagcaggcgagcacc
ctgatcaccgccgactactcgcagatcgagatgcggatcatggcgcacctctccggcgac
gccggtctgatcgaggccttccacagcggcgaggacctgcaccgcttcgtcggcgcgcgg
atcttcggcgtcgagccgtccgacgtcacctcggcgatgcgcaacaaggtcaaggcgatg
tcctacgggctcgcctacggactgagcgcgttcggcctctccaagcagctgcgcatctcc
agcaacgaggcgaagcagctgatgaccgactacttcgtccgcttcggcgcggtccgcgac
tacctccgcacggtcgtcgagcaggcgcgggagaccggctacaccgagacgatcttcggc
cgccgccgccccttccccgacctccagagcggcaaccgcgtcctccgcgacaacgcggag
cgcgccgcgctgaactcgccgatccagggctctgcggccgacatcatgaagatcgcgatg
atcggggtccaggccgacatcggcgagaagggcctggagtcgcggatgctgctccaggtg
cacgacgagctgatcttcgacgtggcccccggcgaggaggacgtgctcgaggaggtcgtc
cgcgcgcggatggccggcgccgtcgatctctccgtccccctcgaggtgcaggtcggccac
ggctccgactgggacgtcgcggcgcactga
DBGET
integrated database retrieval system
