Rathayibacter festucae: C1I64_08515
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Entry
C1I64_08515 CDS
T06173
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
rfs
Rathayibacter festucae
Pathway
rfs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C1I64_08515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfs03400
]
C1I64_08515
Enzymes [BR:
rfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1I64_08515
DNA repair and recombination proteins [BR:
rfs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C1I64_08515
RecFOR pathway proteins
C1I64_08515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
Mg_chelatase
Zeta_toxin
MCM
AAA_22
AAA_14
nSTAND3
IstB_IS21
Sigma54_activ_2
AAA_3
AAA_18
NTPase_1
NB-ARC
Rad17
AAA_33
AAA_25
NPHP3_N
AAA_24
ABC_tran
RNA_helicase
DnaB_C
Motif
Other DBs
NCBI-ProteinID:
AZZ54228
UniProt:
A0A3T0T6J5
LinkDB
All DBs
Position
complement(1819471..1820499)
Genome browser
AA seq
342 aa
AA seq
DB search
MGPEVASEAEIAFEGALRPKNLGEFVGQRKVRGQLELLLKAAAMQGRTPDHILLAGPPGL
GKTTLAMIVAEESSSPLRMSSGPAIQHAGDLAAVLSSLLPGEILFIDEIHRMARSAEEML
YLAMEDFRIDIMVGKGAGATSVPLDLAPFTLVGATTRSGLLPNPLRDRFGFTAHLEFYAE
DELRQVLTRAARLLDLDIDGEAVAEIAGRCRGTPRIANRLLRRVRDFALVHGGRADVTAV
RAALDLYDVDELGLDRLDRAVMDIVLTRFDGGPVGLNTLAVSVGEEAETVEAVVEPFLVR
IGLLTRTPRGRVATPAAYRHFGVDPRGGAASASQRPLFGDDL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgggcccggaggtcgcctccgaggccgagatcgccttcgagggcgcgctccgcccgaag
aacctcggcgagttcgtcggccagcgcaaggtccgcggccagctcgagctgctgctcaag
gcggcggcgatgcagggccgcacgcccgaccacatcctgctggccggcccgcccggcctc
ggcaagaccaccctcgcgatgatcgtggcggaggagagctcctcgccgctgcggatgtcc
agcggccccgcgatccagcacgccggcgacctggccgccgtgctctcctcgctgctgccc
ggcgagatcctcttcatcgacgagatccaccggatggcgcgctccgcggaggagatgctc
tacctcgcgatggaggacttccggatcgacatcatggtcggcaagggcgccggcgcgacc
tccgtccccctggatctcgcgccgttcaccctcgtcggcgcgaccacgcgctcgggcctc
ctgccgaatccgctgcgcgaccgcttcggcttcaccgcccacctcgagttctacgccgag
gacgagctgcgccaggtgctcacccgcgccgcgcggctgctcgacctcgacatcgacggc
gaggcggtcgccgagatcgcgggccgctgccggggcaccccgcgcatcgcgaaccgcctg
ctgcgccgggtccgcgacttcgcgctcgtccacggcggccgtgccgacgtcaccgcggtc
cgcgccgcactcgacctctacgacgtcgacgagctcggcctcgaccgcctcgaccgcgcc
gtgatggacatcgtgctcacccgcttcgacggcggaccggtcggcctcaacacgctcgcg
gtctccgtcggcgaggaggcggagacggtcgaggcggtcgtcgagccgttcctcgtccgg
atcgggctgctcacccgcacgccgcgcggccgcgtcgcgaccccggccgcgtaccggcac
ttcggcgtggatccgcgcgggggagccgcctcggcctcccagcggcccctgttcggagat
gacctataa
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