Rathayibacter festucae: C1I64_09230
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Entry
C1I64_09230 CDS
T06173
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rfs
Rathayibacter festucae
Pathway
rfs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rfs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C1I64_09230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfs02000
]
C1I64_09230
Transporters [BR:
rfs02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
C1I64_09230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TetR_C_8
Motif
Other DBs
NCBI-ProteinID:
AZZ52215
UniProt:
A0A3Q9UYJ7
LinkDB
All DBs
Position
complement(1967337..1969010)
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AA seq
557 aa
AA seq
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MTFHRSRPLRRSGTAAAALALASALALSACSGASGAGTAADDATPVDGGRLSLAFFPDNA
AFSCVDPFQTYWIEHRTVIRNVADSLTDQDPETGEIQPWLATDWSVNDAGTEYTFDLRTD
VTFSDGTPFTAESVKTSFDNDKATLAQLPSAYGGVYLAGYSGTEVVDADTVKVVFSTPNA
AFLQGTSTTNLAIFAASSYERTPEERCLGGIVGSGPFTLTGYTPGTGITLDKRDGYAWGS
ALRENTGEAHLDGIDISYVAEDSVRVGQLTSDEIDIAWPRNPISENDQAVITGSGDTVES
RSLPGPASNYYPNVAEGKILSDERVRQAVQKAIDRDTYATTVFGSGYPAATSIYNTTTPF
YEDESSKLAFDAEGAGELLDEAGWKLGDDGYRSKDGRRLTLSVPIVTQFGAGDQLIQDQL
KQVGIELELNVITNAQRADVLSSGDYDLISTYYTRADPGVIQWIIDSRYAGSKAQATNGL
DAEQAATVQALLDEGVQTIDTAARAEVYGELQDYLIDNALVFPFAERVQLAGVSSAVHGF
RFTSEAFGDFADAWIQP
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgacgttccaccgctcacgccccctccgacgatcgggcaccgccgccgccgcgctcgcc
ctcgcctccgcgctggccctctccgcctgctcgggcgcctcgggcgcgggcacggccgcc
gacgacgcgacccccgtcgacggcggccggctctcgctcgccttcttccccgacaacgcc
gcgttctcctgcgtcgacccgttccagacctactggatcgagcaccgcacggtgatccgc
aacgtcgccgactcgctcaccgaccaggatccggagaccggcgagatccagccctggctc
gcgaccgactggagcgtcaacgacgcgggcaccgagtacaccttcgacctgcgcaccgac
gtcaccttctcggacggcacgcccttcaccgcggagagcgtgaagacctcgttcgacaac
gacaaggcgaccctcgcgcagctgccctcggcctacggcggcgtctacctcgccggctac
tcgggcacggaggtcgtggacgccgacaccgtgaaggtcgtcttctccacgcccaacgcc
gcgttcctgcagggcacctcgaccaccaacctcgcgatcttcgccgcctcctcctacgag
aggacgcccgaggagcgctgcctcggcgggatcgtcggctccggcccgttcacgctgacc
ggctacacccccggcaccggcatcacgctggacaagcgcgacgggtacgcctggggctcg
gccctgcgcgagaacacgggggaggcgcacctcgacgggatcgacatcagctacgtcgcg
gaggacagcgtccgcgtcgggcagctgaccagcgacgagatcgacatcgcctggccgcgg
aacccgatctcggagaacgaccaggccgtgatcacgggctccggcgacacggtcgagagc
cgctcgctgccgggccccgcgagcaactactacccgaacgtcgccgaggggaagatcctc
tcggacgagagggtgcggcaggccgtgcagaaggcgatcgaccgcgacacctacgcgacg
acggtcttcggctccggctacccggccgcgaccagcatctacaacacgacgactccgttc
tacgaagacgagtcgtcgaagctcgccttcgacgccgagggcgcgggcgagctgctggac
gaggcgggctggaagctcggcgacgacggctaccgctcgaaggacgggcggcggctcacg
ctctcggtgccgatcgtcacccagttcggtgccggcgatcagctgatccaggaccagctg
aagcaggtcggcatcgagctcgagctgaacgtgatcaccaacgcccagcgcgccgacgtg
ctgagcagcggcgactacgacctgatctcgacctactacacgcgggccgacccgggagtg
atccagtggatcatcgactcccgctacgccggctcgaaggcgcaggcgacgaacggcctc
gacgccgagcaggccgcgaccgtgcaggccctgctcgacgagggcgtgcagacgatcgac
accgcggcgcgcgccgaggtctacggcgagctgcaggactacctgatcgacaacgccctg
gtcttcccgttcgccgagcgggtgcagctggcgggcgtctcgtcggcggtgcacggcttc
cgcttcacctcggaggcgttcggcgacttcgccgacgcctggatccagccgtga
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