Rathayibacter festucae: C1I64_12865
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Entry
C1I64_12865 CDS
T06173
Name
(GenBank) hypothetical protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rfs
Rathayibacter festucae
Pathway
rfs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C1I64_12865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfs03000
]
C1I64_12865
03400 DNA repair and recombination proteins [BR:
rfs03400
]
C1I64_12865
Enzymes [BR:
rfs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
C1I64_12865
Transcription factors [BR:
rfs03000
]
Prokaryotic type
Helix-turn-helix
AraC family
C1I64_12865
DNA repair and recombination proteins [BR:
rfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C1I64_12865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AZZ52842
UniProt:
A0A3T0T2N0
LinkDB
All DBs
Position
complement(2782793..2783635)
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AA seq
280 aa
AA seq
DB search
MDPRPVDLDANGPFDVVGAANLLLHHSLPGVERVSDDGRRLERLVTVGSRPVPLALKLTS
SGVRVTATDPAVLPLVRAWFDLDSDVEAIGAALALDPLLAPMVAARPGLRATQYPAPFEA
AVMAVLGQQVSVAAARTFGGRVVTAFGSEGERGLRSFPTPEALLAGPIEELRAAIGVTRA
RAATVRAVAAAFADGLVLDRAGDLPEQRRLLLAIPGIGPWTADYLGLRLLGDPDAFPAGD
LVLRRALGGIGTAAADAASQAWRPHRAHAAFHLWASTGAV
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
gtggacccgcgccccgtcgacctcgacgcgaacggccccttcgacgtcgtcggcgccgcg
aacctcctcctgcaccactcgctgcccggggtcgagcgggtctccgacgacggacggcgc
ctcgagcggctcgtcaccgtcgggtcgcggccggtgccgctcgcgctgaagctgacctcg
tccggcgtccgcgtcacggcgaccgaccccgccgtcctcccgctggtgcgcgcctggttc
gatctcgactccgacgtcgaggcgatcggcgccgccctcgctctcgatccgctgctcgcc
ccgatggtcgccgcgcggccgggactgcgggcgacgcagtaccccgcgccgttcgaggcc
gccgtgatggcggtcctcggccagcaggtgtcggtggcggcggcgaggaccttcggcggg
cgcgtcgtgacagcgttcggcagtgagggcgagcggggcctccgctcgttccccacgccc
gaggccctcctcgccggaccgatcgaggagctgcgcgccgcgatcggcgtgacccgggcc
cgcgcggcgaccgtccgcgcggtcgcggcggccttcgccgacgggctggtgctcgaccgc
gcgggcgacctgcccgagcagcgccggctcctgctcgcgatccccggcatcggcccgtgg
accgccgactacctcgggctccggctgctcggcgacccggacgcgttccccgcgggcgac
ctcgtgctgcgccgcgcgctcggcgggatcggcacggcggcggcggacgcggcctcgcag
gcctggcgtccgcaccgcgcccacgcggcgttccacctctgggcgtcgacgggcgccgtg
tga
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