Rathayibacter festucae: C1I64_12990
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Entry
C1I64_12990 CDS
T06173
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rfs
Rathayibacter festucae
Pathway
rfs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rfs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C1I64_12990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfs02000
]
C1I64_12990
Transporters [BR:
rfs02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
C1I64_12990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AZZ52862
UniProt:
A0A3Q9US45
LinkDB
All DBs
Position
complement(2811336..2812862)
Genome browser
AA seq
508 aa
AA seq
DB search
MFRWKRLAAAAIAVTTMVGLTSCAADSGGGASGGSSETLTLGAIQTLSTFAAADSYWANE
SPYMQAVYDSVLRAEPDGTITEGLASEWTYNEDNTVLTLKIRDGVTFSDGSTLDADAVAQ
NLIRFRDGNSPDTNKMADLADAVATDASTVTVTLKQANPTFLFYLTQNAGLVEAPSAFES
ADIQTVPVGSGPYELDAAKTVIGTSYAFTKRDGYWDEDSVHYDNLNINVYSDSTALVNAI
KGGQVNAANTVDNNDLKEIEASGFTVNAFELNWTGLLLLDRDGTIAPALKDVRVRQAINY
AFDKESLLKAIGQGYGTPTTQIFPTSSEGYDESLDDDYPYDPEKAKELLAEAGYPDGFEL
NMPSSSLIGSSTFTLIQQQLSEVGITVTYTDAGNNFIADVLAPKYAATWLTLQQDPDWAL
INFELSPNAIFNPFKNADPELETLIEAVRTADESGYAAAVQAVNAYTVENAWFAPWYRQQ
SSFVTDANTKVETQTGNAYPYLWNITPA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgttccgatggaagaggctggcggccgctgcgatcgccgtcaccacgatggtcggcctg
accagctgcgcggccgactccggcggaggcgcctccggcggctcgagcgagacgctcacg
ctgggtgcgatccagaccctgtcgacgttcgccgcggcggactcgtactgggccaacgag
tcgccctacatgcaggccgtctacgacagcgtgctccgggccgagcccgacggcaccatc
accgagggcctcgcctccgagtggacctacaacgaggacaacacggtcctcaccctgaag
atccgcgacggcgtgaccttctccgacggatcgacgctcgacgccgacgccgtcgcgcag
aacctgatccgcttccgcgacggcaactcgcccgacacgaacaagatggccgacctcgcc
gacgcggtcgcgaccgacgcctcgaccgtcacggtgaccctcaagcaggccaacccgacg
ttcctcttctacctgacccagaacgccggcctcgtcgaggcgccctccgccttcgagtcc
gccgacatccagaccgtcccggtcggctccggcccctacgagctcgacgcggccaagacc
gtgatcggcacctcctacgccttcaccaagcgcgacggctactgggacgaggactcggtc
cactacgacaacctgaacatcaacgtctacagcgactccaccgctttggtgaacgcgatc
aagggcggtcaggtcaacgcggccaacacggtcgacaacaacgacctcaaggagatcgag
gcgtcgggcttcaccgtcaacgccttcgagctcaactggaccggtctgctgctgctcgac
cgcgacggcaccatcgcgccggccctgaaggacgtccgcgtccgccaggccatcaactac
gcgttcgacaaggagtcgctgctgaaggccatcggccagggctacggcaccccgaccacg
cagatcttcccgacctcctccgagggctacgacgagtcgctcgacgacgactacccctac
gaccccgagaaggccaaggagctgctcgccgaggccggctacccggacggcttcgagctg
aacatgccctcgagctcgctcatcggctcctcgaccttcacgctgatccagcagcagctc
tccgaggtcggcatcaccgtcacctacaccgacgccggcaacaacttcatcgccgacgtc
ctcgccccgaagtacgccgcgacctggctcacgctgcagcaggaccccgactgggccctg
atcaacttcgagctcagccccaacgcgatcttcaaccccttcaagaacgccgaccccgag
ctcgagacgctgatcgaggccgtccgcaccgcggacgagtccggctacgccgccgccgtc
caggccgtcaacgcctacacggtcgagaacgcctggttcgccccctggtaccgccagcag
tcgagcttcgtgaccgacgcgaacaccaaggtcgagacccagacgggcaacgcctacccg
tacctctggaacatcaccccggcctga
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