Rathayibacter festucae: C1I64_13780
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Entry
C1I64_13780 CDS
T06173
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rfs
Rathayibacter festucae
Pathway
rfs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1I64_13780 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfs03019
]
C1I64_13780 (recQ)
03400 DNA repair and recombination proteins [BR:
rfs03400
]
C1I64_13780 (recQ)
Enzymes [BR:
rfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1I64_13780 (recQ)
Messenger RNA biogenesis [BR:
rfs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C1I64_13780 (recQ)
DNA repair and recombination proteins [BR:
rfs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C1I64_13780 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
AZZ52998
UniProt:
A0A3Q9USC5
LinkDB
All DBs
Position
complement(2977561..2979720)
Genome browser
AA seq
719 aa
AA seq
DB search
MPRPSPERRSPGAASEAAGRVPRVTEPTATALSTAERPTADAPAGSSAAAQEILERVFGY
GSFRGEQQAIVEQVIGGGDAVVLMPTGGGKSLCYQIPSIVRPGTGVVVSPLIALMQDQVD
ALRANGVRAEFLNSTQDMGERQRVERAYLDGELDLLYVAPERLGNEGTKQFLARGRIALF
AIDEAHCVSQWGHDFRPDYLALGELAERWPDVPRIALTATATEATHREITTRLHLGAARH
FISSFDRPNIQYRIVNKVEPRKQLIDFLKREHADDAGIVYALSRKSVEATAEALRAAGFD
AVAYHAGLDARVRAAAQSRFLREEGVIVCATIAFGMGIDKPDVRFVAHIDLPKSVEGYYQ
ETGRAGRDGLPSTAWLAYGLQDVVQQRRMIDESPGDLAHRRRMSAHLDAMLALSETVQCR
RMNLLAYFGQESTPCGNCDTCLEPPASWDGTVAAQKFLSTVVRLKRERNQQFGAGHIIDI
LRGKTTPRTTQHKHDSIATWGIGVDLSDTQWRGVARQLLAQSLLGVNDDGFGTLVLTPES
ASVLSGERKVELRQEPERPARSSGSSRSGRSTVSDLSAEAQPLFERLREWRVAQARAQSV
PAYVVFNDATLREIATVEPTTIDALSVIGGVGQKKLITYGAAVLAVVAGETPEIAEPDAN
QEPAPARRQPAARSTAGRSSGARPSFGGERSGPPVSSAPPEDDWVPPEEPDEDPGWDTY
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
ctgccgcgaccctccccagaacgccgctcgcccggggccgcgtcggaggcggcgggtaga
gttccacgggtgactgagccgaccgcgaccgccctctcgaccgccgagcgccccaccgcg
gacgccccggccggctcctccgccgcggcccaggagatcctcgagcgggtcttcggctac
ggctcgttccgcggcgagcagcaggccatcgtcgagcaggtcatcggcggcggcgatgcg
gtcgtgctgatgcccacgggcggcggcaagtcgctctgctaccagatcccctcgatcgtc
cggccgggcaccggcgtcgtcgtctcgccgctgatcgccctgatgcaggaccaggtcgac
gccctgcgcgcgaacggcgtccgcgccgagttcctcaactccacccaggacatgggcgag
cgccagcgcgtcgagcgcgcctacctcgacggcgagctcgacctcctctacgtcgccccc
gagcgcctcggcaacgagggcaccaagcagttcctcgcccgcggccgcatcgcactgttc
gccatcgacgaggcgcactgcgtgagccagtggggccacgacttccgtcccgactacctc
gccctcggcgagctggccgagcgctggcccgacgtcccgcgcatcgccctcacggcgacc
gccaccgaggcgacccaccgcgagatcaccacccgcctgcacctcggcgcggcccgccat
ttcatctccagcttcgaccgcccgaacatccagtaccgcatcgtcaacaaggtcgagccg
cgcaagcagctgatcgacttcctcaagcgcgagcacgccgacgacgcgggcatcgtctac
gcgctctcccgcaagagcgtggaggcgacggccgaggccctgcgcgccgcaggcttcgac
gcggtcgcgtatcacgcgggtctcgacgcccgggtccgggccgccgcgcagtcgcgcttc
ctccgcgaggagggcgtcatcgtctgcgccaccatcgccttcggcatgggcatcgacaag
ccggacgtccgcttcgtggcgcacatcgacctgccgaagtcggtcgagggctactaccag
gagacgggtcgcgccggccgcgacggcctgccctccaccgcctggctcgcctacggcctg
caggacgtcgtccagcagcgccggatgatcgacgagtccccgggcgacctcgcgcaccgg
cggcggatgtccgcgcacctcgacgcgatgctcgccctctccgagacggtgcagtgccgc
cggatgaacctcctcgcctacttcggccaggagagcaccccctgcggcaactgcgacacc
tgcctcgagccgcccgcctcgtgggacggcacggtcgccgcgcagaagttcctctcgacg
gtggtccggctcaagcgcgagcgcaaccagcagttcggcgccggccacatcatcgacatc
ctccgcggcaagaccaccccgcggacgacccagcacaagcacgactcgatcgccacctgg
gggatcggcgtcgacctcagcgacacccagtggcgcggagtcgctcgccagctcctcgcg
cagagcctgctcggcgtgaacgacgacggcttcggcacgctcgtgctcactcccgagtcg
gcctcggtgctgagcggcgagcgcaaggtcgagctccggcaggagcccgagcgccccgca
cgctcgagcggctcgtcgcgctccggccgctccaccgtctccgacctctcggccgaggcg
cagcccctgttcgagcggctccgggagtggcgcgtcgctcaggcccgtgcgcagtcggtc
ccggcctacgtcgtcttcaacgacgcgacgctccgcgagatcgccacggtcgagccgacc
acgatcgacgccctcagcgtcatcggcggcgtcggccagaagaagctgatcacctacggc
gcggcggtgctcgccgtcgtcgcaggcgagacgcccgagatcgccgagcccgacgcgaac
caggagccggccccggcgcgccgccagcccgcggcgcggtcgacggccggccggtcgtcc
ggcgcccgcccgtccttcggcggcgagcgctccggcccgcccgtctcctccgccccgccg
gaggacgactgggtcccgccggaggagcccgacgaggaccccggctgggacacctactga
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