Rathayibacter festucae: C1I64_13915
Help
Entry
C1I64_13915 CDS
T06173
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rfs
Rathayibacter festucae
Pathway
rfs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rfs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C1I64_13915
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfs02000
]
C1I64_13915
Transporters [BR:
rfs02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
C1I64_13915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AZZ53024
UniProt:
A0A3Q9UZQ2
LinkDB
All DBs
Position
complement(3011012..3012670)
Genome browser
AA seq
552 aa
AA seq
DB search
MTLRRSALAALAASALLLTGCTAASDGDAGGDSSTPVADGVLTYATGDAEPTCLDPHVGG
NYPQALLATQVLESLVSRSDDGTITPWLAESWTVSDDALSYDFTLREGLTFTDGTPLDAD
AVAANIEHLQDPATKSSTGYLAVAKVESVTAVSPTVARFALSAPDSALLESLSQPWTAIE
SPAGIARGEEANCGAPVGTGPFTVTEWVKQDHVTLTRNDDYDAATGPTGEGHDGPAYLSS
ITWRFIPDSATRYAALQAGEVDVIDNAQPDTLAAATDASDLVEIDAPRPGSVNRLELNSG
QAPFDDQSVREAFIRAVGVNDAIDSLFFGTAERSYSPLSSSEATAYSDPSLFEDAGSDDE
IAAAEDLLTAAGWVDSDGDGIREKDGAPLVLRLPVSTNQSIPAEQSLFEQIQASAKVAGF
DVQISLLDLSSWYTALAANEYELVSAPYTKVGPDVLRTLYASSGITPAPSGYFANHAQVN
DPALDALLEQASATVDETERADLYSQAQRIVLEGYWILPLYDQQNHYLHRSAVQGVAALA
TVSTPWFADAWL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgactctgcgccgttccgccctcgccgccctcgcggcctccgccctcctgctgaccggc
tgcaccgccgcgtccgacggcgacgccgggggagactccagcacgccggtcgccgacggc
gtcctcacctacgcgaccggcgacgccgagcccacctgcctcgacccgcacgtcggcggc
aactacccgcaggcgctgctcgcgacccaggtcctggagtcgctcgtctcgcgcagcgac
gacggcaccatcaccccgtggctcgcggagtcgtggaccgtctcggacgacgcgctcagc
tacgacttcaccctccgcgagggcctgaccttcaccgacggcaccccgctcgacgccgac
gcggtcgccgcgaacatcgagcacctgcaggacccggcgacgaaatcctcgaccggctac
ctcgccgtcgcgaaggtggagtcggtcaccgccgtctcgccgaccgtcgcccgcttcgcc
ctcagcgcccccgacagcgcgctgctcgagtcgctctcgcagccgtggaccgcgatcgag
tcgcccgccggcatcgcccgcggcgaggaggccaactgcggggcgcccgtcggcaccggt
ccgttcacggtgacggagtgggtcaagcaggaccacgtgaccctcacccgcaacgacgac
tacgacgccgcgaccggcccgaccggcgagggacacgacggccccgcctacctctccagc
atcacctggcgcttcatccccgactccgccacccgctacgcggcactgcaggccggcgag
gtggacgtgatcgacaacgcccagcccgacacgctcgcggccgccaccgacgcctccgac
ctggtcgagatcgacgcgccccgccccggctcggtgaaccgcctcgagctcaactcgggc
caggcgccgttcgacgaccagagcgtgcgcgaggcgttcatccgcgccgtcggcgtcaac
gacgccatcgactccctcttcttcggcaccgccgagcgctcgtactcgccgttgtcgagc
agcgaggcgaccgcctactccgacccgtcgctcttcgaggacgccggctcggacgacgag
atcgccgccgcggaggacctcctcaccgccgcgggctgggtcgactccgacggcgacggg
atccgcgagaaggacggcgcgccgctcgtcctgcgcctgccggtcagcaccaaccagtcg
atcccggccgagcagtcgctgttcgagcagatccaggcgtcggcgaaggtcgccggcttc
gacgtgcagatcagcctgctcgacctctccagctggtacaccgcgctcgcggcgaacgag
tacgagctggtcagcgcgccgtacacgaaggtcggacccgacgtcctgcgcaccctctac
gcgtcctccggcatcaccccggcgccgagcggctacttcgccaaccacgcccaggtgaac
gaccccgccctcgacgccctgctcgagcaggcgagcgcgaccgtcgatgagacggagcgc
gccgacctctactcgcaggcccagcggatcgtgctcgagggctactggatcctgccgctc
tacgaccagcagaaccactacctgcaccgctcggccgtccagggcgtcgccgccctggcc
accgtctcgaccccctggttcgcggacgcctggctctga
DBGET
integrated database retrieval system
