Rathayibacter festucae: C1I64_19595
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Entry
C1I64_19595 CDS
T06173
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rfs
Rathayibacter festucae
Pathway
rfs00900
Terpenoid backbone biosynthesis
rfs01100
Metabolic pathways
rfs01110
Biosynthesis of secondary metabolites
Module
rfs_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
rfs00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
C1I64_19595
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rfs01006
]
C1I64_19595
Enzymes [BR:
rfs01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
C1I64_19595
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
C1I64_19595
2.5.1.29 geranylgeranyl diphosphate synthase
C1I64_19595
Prenyltransferases [BR:
rfs01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
C1I64_19595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AZZ54019
UniProt:
A0A3T0T630
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All DBs
Position
4278090..4279142
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AA seq
350 aa
AA seq
DB search
MVLSRRRQEHVDAVLDRFFSLARSRATRLGPRYLTLWQTIEANTRGGKRFRPLMVISAYE
AHGGLDPEASAHLGAAFELLHTALIVHDDVIDRDFVRRGGPNVSGSYRDEATTAGLSIPI
AEHRGTSVAVIAGDLALTGAHRLVEGVGASDGVRARLLTLLDEAVFASAAGELADVDFSL
MPGMPSVDEVLEMERMKTAVYSFEAPLQAGAILAGADDAAVEALGEFGRGIGIAYQIVDD
LLGVFGSEGQTGKTTLGDLREGKRTVLIAHAAGTDRWPEIEGLIGDEHLDPDTAERVRCI
LEECGSRGYAEALASDFANRAWDALHTPAVTEAFRTEMRPLVSSVLGRTR
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtggttctctcccgaaggcggcaggagcacgtcgatgctgtcctcgaccggttcttctcg
ctggcgcgctcgcgcgcgacccggctcggaccccgctacctgaccctctggcagaccatc
gaggcgaacacccgcggcggcaagcgcttccgcccgctgatggtgatctcggcctacgag
gcgcacggcggactcgaccccgaggcgtccgcccacctgggcgcggccttcgagctgctg
cacaccgcgctgatcgtgcacgacgacgtgatcgaccgcgacttcgtccgccgcggcggc
ccgaacgtctccggcagctaccgcgacgaggcgacgaccgccggcctctcgatcccgatc
gccgagcaccgcggcacctccgtcgccgtcatcgcgggcgacctcgcgctcaccggcgcg
caccgcctggtcgagggcgtcggcgcctccgacggcgtccgcgcccggctgctcaccctg
ctcgacgaggccgtcttcgcctccgccgcgggcgagctggccgacgtcgacttctcgctg
atgcccggcatgccctccgtcgacgaggtgctcgagatggagcggatgaagaccgcggtc
tactcgttcgaggcgccgctgcaggccggcgcgatcctggccggcgccgacgacgcggcg
gtcgaggcgctcggcgagttcggccgcggcatcggcatcgcctaccagatcgtcgacgac
ctgctcggcgtcttcggctccgaggggcagaccggcaagaccacgctcggcgatctccgc
gagggcaagcgcacggtgctgatcgcgcacgcggccggcaccgaccgctggccggagatc
gaggggctgatcggcgacgagcacctcgacccggacacggcggagcgggtgcgctgcatc
ctcgaggagtgcggctcgcgcggctacgcggaggcgctcgcgagcgacttcgcgaaccgg
gcctgggacgcgctgcacacccccgcggtgacggaggcgttccgcaccgagatgcggccc
ctcgtctccagcgtcctcgggcgcacccgatga
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