Roseobacter fucihabitans: ROLI_000020
Help
Entry
ROLI_000020 CDS
T10342
Symbol
dnaN
Name
(GenBank) Beta sliding clamp
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
rfu Roseobacter fucihabitans
Pathway
rfu03030
DNA replication
rfu03430
Mismatch repair
rfu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ROLI_000020 (dnaN)
03430 Mismatch repair
ROLI_000020 (dnaN)
03440 Homologous recombination
ROLI_000020 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfu03032
]
ROLI_000020 (dnaN)
03400 DNA repair and recombination proteins [BR:
rfu03400
]
ROLI_000020 (dnaN)
Enzymes [BR:
rfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ROLI_000020 (dnaN)
DNA replication proteins [BR:
rfu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ROLI_000020 (dnaN)
DNA repair and recombination proteins [BR:
rfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ROLI_000020 (dnaN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
DUF6225
Motif
Other DBs
NCBI-ProteinID:
WVX46944
UniProt:
A0ABZ2BPX5
LinkDB
All DBs
Position
1551..2669
Genome browser
AA seq
372 aa
AA seq
DB search
MKISIERAALLKAVSQAQSVVERRNTIPILANVLIEAEGSDVSFRATDLDIEVVDKAPAQ
VERAGATTVSATTLHEIVRKLPDGALVTLTADGATGRLTVEAGRSNFSLATLPKEDFPVM
ASSEYASNFSAPAPVLRRLFDKSKFAISTEETRYYLNGVYMHVSDGEEGRVLRCVATDGH
RLARIDANLPVGAEDMPGVIVPRKTVGELRKLLDDDDMKIAVSVSETKIRFATPEITLTS
KVIDGTFPDYTRVIPQGNTRKLEVDASDFAKAVDRVATVSSERSRAVKLQLDEDRLILSV
NAPDSGAAEEELAVAYSDERLEIGFNAKYLLEIASQVDRENAVFMFNSSGDPTLMREGND
MSAVYVVMPMRV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcagcatcgaacgtgccgccctgctgaaagcggtgtcccaagcgcaatctgtt
gttgagcgacgcaacaccattcccatcctggccaatgtattaattgaggccgaaggcagc
gacgtttcctttcgcgccacggacctcgacatcgaggtcgtggacaaagcgcccgcccaa
gtggaacgcgccggggcgacgacggtatcggccaccaccctgcatgaaatcgtgcgcaaa
ctccccgatggggcgcttgtcactctgacggcggatggtgcaacgggccgccttacggtg
gaggcgggccggtcgaatttctcgctggcgaccctgccgaaagaggacttcccggtcatg
gcctcctcggaatatgcctcgaacttctccgcgcccgcgcccgtgttgcggcgattgttt
gataaatcgaaattcgcgatttcgaccgaagagacacggtattacctgaatggcgtctat
atgcatgtctcggatggcgaagaggggcgggttttgcgctgtgtcgcaacggatgggcat
cgattggcccggatcgacgccaatctgccggtcggggccgaagatatgcccggcgtcatc
gtgccgcgtaaaaccgttggtgaattgcgcaaattgcttgatgacgatgacatgaagatc
gccgtgtcggtgtcggagacgaaaattcgctttgccacgcccgaaatcacgctgacctcc
aaggtcattgacggaacgttccccgattacacccgcgtgatcccccagggcaacacgcgc
aagctggaggtggacgccagcgatttcgccaaagccgtggaccgtgtggcaacagtcagc
tcggaacgctcgcgcgccgtcaaattgcaactggacgaggatcgcctgatcctgtcggtc
aatgcgcccgacagcggagccgcagaggaagagctcgccgtggcctatagcgatgaacgg
ctggagatcggcttcaacgcgaaatacctgctcgaaatcgcgagccaggtggatcgtgaa
aacgcggtgttcatgttcaactcctccggtgatcccaccttgatgcgcgaaggcaatgat
atgtcggcagtctatgtcgtcatgccgatgcgcgtttga
DBGET
integrated database retrieval system
