Roseobacter fucihabitans: ROLI_000520
Help
Entry
ROLI_000520 CDS
T10342
Name
(GenBank) hypothetical protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rfu Roseobacter fucihabitans
Pathway
rfu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ROLI_000520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfu02000
]
ROLI_000520
Transporters [BR:
rfu02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ROLI_000520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
DUF6520
UBA_2
Motif
Other DBs
NCBI-ProteinID:
WVX46994
UniProt:
A0ABZ2BLG7
LinkDB
All DBs
Position
complement(49821..50927)
Genome browser
AA seq
368 aa
AA seq
DB search
MKLTKTLLASTALTVVAGMTFADGHMANEMTIVSWGGAYSNSQQQAYHNPYSEKTGVKII
NDESSAEAVAKLRAMNEAGNVTWDVVDVVAADAIRLCDEGLAMEIDFDEQLAPAPDGTSA
SDDFGDLLVSDCFIPQIVYSTTFGYRTDMVGDTPPTSVCAVFDTDAYPGKRALEKRPINN
MEWALLCDGVAKDEVYDVLETDEGQQQALDKLATIKDDVIWWSAGADTPQLLADGEVVMG
STYNGRLFSVIEEQNQPVAMLWDAQVFDLDGWIIPAGLSDERKARALDYIYFATDTQRLA
DQAKWISYGPARASSAPLVGQHADLGIDMAPHMPTDPENAKNTFLYNYEFWADYRDDIDA
KFQAWLAQ
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaccaagacgcttttggcatccaccgcactgactgttgtggctggcatgact
ttcgctgacggccatatggcaaacgaaatgaccatcgtcagctggggtggtgcttattcc
aattcacagcaacaagcctatcacaacccttactcggaaaagaccggcgttaagatcatc
aacgatgaatcttcggccgaagctgtggccaagctgcgcgcgatgaacgaagctggaaac
gtaacctgggacgtggtcgacgtggttgcagcagatgccatccgcctgtgcgatgaaggc
ctcgccatggaaatcgattttgacgaacagcttgcaccggcgccggatggcacatcggca
tcggatgatttcggtgatttgctggtgtctgactgcttcattccgcagatcgtctactcc
acaaccttcggctaccgcaccgacatggtgggcgatacgccaccgacatctgtctgcgcc
gtctttgacacagacgcttatccgggcaaacgggctttggaaaaacgtccgatcaacaac
atggaatgggccttgctctgtgacggtgtcgccaaggacgaagtctatgacgttctggaa
accgacgaaggtcaacagcaggcactcgacaagctggcaaccatcaaagacgacgtgatc
tggtggtctgcgggtgcggatacgccacagttgctggcggacggcgaagtcgtgatgggc
tccacatacaacgggcgtttgttctcggtgattgaggaacagaaccaacccgttgccatg
ctttgggacgcacaggtgttcgaccttgatggctggatcattcccgccggtctgagcgat
gagcgcaaagcgcgcgctttggattacatctactttgccacagacacgcagcgtctcgcg
gatcaggccaagtggatcagctatggcccggcccgtgcatcctctgcgccgctcgtcggg
cagcatgccgatctgggtatcgacatggcgccgcatatgccaaccgatcctgaaaacgca
aagaatacgttcctctataactacgagttctgggcggattaccgcgacgacatcgacgcc
aaattccaggcgtggctggcacaataa
DBGET
integrated database retrieval system