Roseobacter fucihabitans: ROLI_001130
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Entry
ROLI_001130 CDS
T10342
Symbol
glyA2_1
Name
(GenBank) Serine hydroxymethyltransferase 2
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rfu Roseobacter fucihabitans
Pathway
rfu00260
Glycine, serine and threonine metabolism
rfu00460
Cyanoamino acid metabolism
rfu00630
Glyoxylate and dicarboxylate metabolism
rfu00670
One carbon pool by folate
rfu00680
Methane metabolism
rfu01100
Metabolic pathways
rfu01110
Biosynthesis of secondary metabolites
rfu01120
Microbial metabolism in diverse environments
rfu01200
Carbon metabolism
rfu01230
Biosynthesis of amino acids
rfu01240
Biosynthesis of cofactors
rfu04981
Folate transport and metabolism
Module
rfu_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ROLI_001130 (glyA2_1)
09102 Energy metabolism
00680 Methane metabolism
ROLI_001130 (glyA2_1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ROLI_001130 (glyA2_1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
ROLI_001130 (glyA2_1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
ROLI_001130 (glyA2_1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
ROLI_001130 (glyA2_1)
Enzymes [BR:
rfu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
ROLI_001130 (glyA2_1)
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WVX47049
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All DBs
Position
107802..109088
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AA seq
428 aa
AA seq
DB search
MTATDIKTFFEQPLETRDPEIFNAIQGELGRQREEIELIASENMTSAAVMEAQGSVMTNK
YAEGYPGRRYYGGCQYVDVAENLAIDRAKQLFGCDFANVQPNSGSQANQGVFQALLKPGD
TILGMNLASGGHLTHGAAPNQSGKWFNAVQYGVRKQDNLIDYDEVQALASAHQPKMIIAG
GSAIPRVIDFAKMREIADSVGAYLHVDMAHFAGLVAAGEHPSPFPHAHVATTTTHKTLRG
PRGGMIVTNDEIIAKKVNSAIFPGIQGGPLMHVIAAKAVAFGEALQPEFKSYMKAVRANA
DALADQLIKGGLDIVTGGTDTHVMLVDLRPKGVTGNITDAALGRAHITTNKNGIPFDPEK
PTVTSGIRLGTPAATTRGFGEGEFRQIADWIVQVVDGLAANGPDRNGEVEKKVAREVVAL
CKKFPIYA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgaccgacatcaaaacgttctttgagcagcctctcgagactcgggatccagag
atttttaatgccattcaaggggaacttggacggcaacgcgaagagatagaacttatcgcg
tccgaaaacatgacttctgcggccgtgatggaggcgcaagggtctgtcatgaccaacaaa
tacgccgaagggtatccggggcgacggtattatggcggctgccaatatgtggacgtggct
gagaaccttgcaattgatcgcgcaaagcaattgtttggatgtgactttgccaatgtgcag
cctaactcgggctctcaggccaatcagggcgtgtttcaggctttactaaaaccgggtgat
acgatcctcgggatgaacctggcgtctggtgggcacctgacgcatggggcggcaccgaac
caatccggcaagtggttcaacgcggtgcaatatggtgtgcgcaagcaggataacctgatc
gattatgatgaggtgcaggccctggcaagcgcgcatcagccaaagatgatcatcgccggt
ggatcagcgattccgcgcgtcatcgactttgccaagatgcgcgagattgctgacagtgtt
ggtgcgtatctgcatgtggacatggcgcatttcgccggtcttgtggcggcgggcgagcac
cccagcccatttccgcatgcccatgttgcaacgacgacaacgcataagaccttgcggggt
ccacgcggcggtatgatcgtcacgaacgatgaaataattgccaagaaggtcaattccgcc
attttcccaggtattcagggcgggcccctcatgcacgtcatcgcggcaaaggctgtggct
ttcggcgaagcgctgcaacccgaattcaaatcctacatgaaagccgtgcgcgccaatgcc
gacgcgctggcggatcaactcatcaagggcggattggacattgtgacaggtggcacggac
acccatgtgatgctggtcgatctgcgccccaaaggcgtaaccggcaacatcaccgatgcc
gccttgggtcgcgcccatatcaccaccaataagaatggcattccgtttgaccctgaaaaa
ccgactgtgacgtcgggcatccgtcttggcacgcctgcggcaacaacacgtggatttggt
gagggtgagttccggcaaattgcagattggatcgttcaggtggtagatgggctcgcggcc
aatggtccggacaggaatggcgaagtcgagaagaaagtggcgcgtgaagtggttgcgctt
tgcaagaaattcccgatttatgcctga
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