Roseobacter fucihabitans: ROLI_002030
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Entry
ROLI_002030 CDS
T10342
Name
(GenBank) hypothetical protein
KO
K22225
siroheme decarboxylase [EC:
4.1.1.111
]
Organism
rfu Roseobacter fucihabitans
Pathway
rfu00860
Porphyrin metabolism
rfu01100
Metabolic pathways
rfu01110
Biosynthesis of secondary metabolites
rfu01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
ROLI_002030
Enzymes [BR:
rfu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.111 siroheme decarboxylase
ROLI_002030
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Gene cluster
GFIT
Motif
Pfam:
NirdL-like_HTH
AsnC_trans_reg2
HTH_AsnC-type
wHTH-HSP90_Na-assoc
Motif
Other DBs
NCBI-ProteinID:
WVX47138
LinkDB
All DBs
Position
complement(205864..206313)
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AA seq
149 aa
AA seq
DB search
MEIDDTDRRIINTLQTGFPIAPRPFAIAAKGLGLQEDELIARLARLKEGGIITRFGPFLD
AAAMGGAFCLCAMEIPQAQFEEMTETVNGFDAVAHNYARDHRLNMWFVLATETPEGIAEV
AAGIEAVTGLPVYQFPKLKEFFIGFRVAA
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atggagattgacgacacggatcgacgcatcatcaacactttgcagaccggctttccaatc
gcgccgcgccctttcgccattgcggccaagggcctcgggttgcaagaagatgagctgatc
gcacggcttgcccgattgaaagagggcggtatcatcacacggtttggtccgtttctggac
gcggccgcgatgggcggggcgttttgcctttgtgcaatggaaattccgcaagcgcagttc
gaagagatgaccgaaacggtgaacggatttgacgcagtggcgcataattacgcgcgcgat
catcggctgaacatgtggttcgtactggccaccgaaacgcctgagggcatcgcagaggtg
gcggcgggtatcgaggcggttaccggtctgccagtctatcaattccccaaactcaaggag
tttttcatcggtttccgggtggcggcatga
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