Roseobacter fucihabitans: ROLI_003810
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Entry
ROLI_003810 CDS
T10342
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rfu Roseobacter fucihabitans
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rfu03016
]
ROLI_003810 (truB)
Enzymes [BR:
rfu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ROLI_003810 (truB)
Transfer RNA biogenesis [BR:
rfu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ROLI_003810 (truB)
Prokaryotic type
ROLI_003810 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WVX47314
LinkDB
All DBs
Position
complement(382120..383064)
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AA seq
314 aa
AA seq
DB search
MGPVAEKNEDTMGRRRNGREISGWMIVDKPAGLTSTAVVNKVRWALDAKKAGHAGTLDPD
ATGVLAVALGEATKTVPYVTEALKAYEFTVRLGQATNTDDAEGEIIATSDLRPSDAAIKE
ALSAFIGDIEQIPPQFSAVKIDGERAYKRARDGETMEIAARPLYVESLLLVDRPDADHVT
LEMVCGKGGYVRSVARDMGAALGCHGHVRELRRIWSGPFEASDGLTLAQIEEIARTEALD
AHIRPVEEAFIALPEVKATQEGATRLRNGNPGMVIAHNIEYGEECWASHEGQVVAIGRYK
SGALHPTRVLNIKN
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgggaccggtcgcagagaagaatgaggataccatgggtcgcagacgcaacggcagagag
atatcgggctggatgatcgtggacaaacccgccgggctgacctccacggccgtggtgaac
aaggtccgctgggcgcttgacgccaagaaggcaggccatgcaggcacgcttgatccggac
gcgaccggcgttttggcggtggctctgggtgaggcgaccaaaaccgttccctatgtgact
gaagccttgaaggcctatgagtttaccgtccgcctgggacaggccaccaataccgatgac
gccgaaggagagatcatcgcaacaagtgatctgcgccccagcgacgccgcgatcaaagag
gctttaagcgcctttatcggggatatcgagcagatcccgccgcaattttcagccgtcaag
atcgacggcgaacgggcttataaacgcgcgcgggacggcgaaaccatggagattgccgcg
cgcccgctttatgtcgaaagcctgctgctggttgatcggccggacgcagatcatgtcacg
ctggaaatggtctgcggcaagggtggctatgtgcgctcggttgctcgcgatatgggggcg
gccctggggtgtcatggtcacgtgcgggaattgcgccgcatctggtcgggtccgttcgag
gccagcgatgggctgaccctggcacaaatcgaggagatcgcacgcaccgaggcgcttgat
gcgcatatccgccccgttgaggaggcctttatcgcgctgccagaggtcaaagccacgcag
gagggcgcaacgcgcctgcgcaacggcaatcccggcatggtgatcgcccataatattgag
tatggcgaggagtgctgggcgtcccatgaggggcaggttgtcgccatcggacgctacaaa
tccggcgcgttgcaccccacacgcgttctgaatattaagaactga
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