Roseobacter fucihabitans: ROLI_003870
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Entry
ROLI_003870 CDS
T10342
Symbol
rsmB_1
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
rfu Roseobacter fucihabitans
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rfu03009
]
ROLI_003870 (rsmB_1)
Enzymes [BR:
rfu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
ROLI_003870 (rsmB_1)
Ribosome biogenesis [BR:
rfu03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
ROLI_003870 (rsmB_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_25
MTS
Methyltransf_31
Methyltransf_37
Methyltransf_11
FtsJ
Methyltransf_23
Methyltransf_15
Methyltransf_12
TehB
CMAS
Motif
Other DBs
NCBI-ProteinID:
WVX47320
UniProt:
A0ABZ2BQ22
LinkDB
All DBs
Position
386009..387283
Genome browser
AA seq
424 aa
AA seq
DB search
MSDTGVPARRSAVYLLDEILDEGRLMSELLGAGVLDKLPVEDRARAARLALDTLRGLERA
DRILQKHLKKYPPSTVRNALRVGTIELCQGAAAHGVVNAMVELVSRHNRYSHLKGLTNAV
LRKVAADGPETWNTLRVPRLPKWLRVPLVQAWGPEAMAAMEAVHFAGAPLDLTAKADASA
VAAATGGIVLPSGSVRIKEAGQVSTMPGFEAGDWWVQDAAAALPVQVLAPQPGEKILDLC
AAPGGKTMQLAARGAHVTAVDDSAGRMARVKDNLTRTGLKAQLIVQDARVTAGEYDAILL
DAPCSATGTIRRHPDLPHAKDGSEFSALIELQEQFIDHAWSLLKPGGRMVFCTCSLLPDE
GEVQVDEALLRHSDMQVDKAALDVPGVDAAWRTVEGGLRLRPDYWSGLGGMDGFYIACLR
KAPA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataccggcgttccggcgcgcagaagtgcggtttacctgctcgacgagatcctt
gatgaagggcggctgatgtctgaactcctgggcgctggcgttcttgacaaactgcccgtg
gaggatcgcgcccgcgctgcccggctggcgctcgacaccctgcgcggtttggaacgtgcg
gaccgtattttgcagaaacatctcaagaaatacccgccttcgacggtgcgcaatgcgttg
cgcgtggggaccattgaattgtgccagggcgcagcagcgcatggtgtggtgaatgccatg
gtcgaattggtatcacggcacaatcggtattcacatctcaaggggctcacgaatgcggtc
ttgcgcaaagtcgccgcggacggccccgaaacatggaacaccctgcgtgtgccgcgcttg
cccaaatggttgcgggtgccgctggttcaggcctgggggccggaggcgatggcagcgatg
gaggccgtgcattttgccggtgcgcccctcgatttgacggcaaaggcggatgcctctgcg
gtggccgcggcaacagggggcatcgtgctgccgtccggttcggtgcggatcaaggaggcc
gggcaggtttccacaatgccgggctttgaggcaggtgattggtgggtgcaggacgccgcc
gccgccctgccggtccaggttctggcaccacagcctggcgaaaaaatccttgatctttgc
gcagcacctggcggcaagacgatgcagcttgcggcgaggggtgcgcatgtcacggcggtg
gacgattccgctggccggatggcgcgggtgaaggacaacctgacccgtaccggcctcaaa
gcgcagttgatcgtgcaggacgcgcgcgtcacggccggtgaatatgacgcgatcctgctg
gatgcgccctgttcagccacgggcacgatcaggcgtcaccctgatttgccccacgccaag
gacggatcggaattcagcgcattgatcgagttgcaggaacaattcatcgatcacgcttgg
tcgctactgaaaccgggggggcgcatggtgttttgcacctgttcgctattgcccgatgaa
ggcgaggtgcaggtagatgaagcacttttgcgccattcggacatgcaggtggataaggcg
gcgctggatgtgccgggggtcgatgcggcctggcgtactgttgaaggcgggttgcgtctg
cggccggattattggtccgggcttggcggcatggacgggttttacatcgcctgcctgcgc
aaggcacccgcctga
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