Roseobacter fucihabitans: ROLI_004310
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Entry
ROLI_004310 CDS
T10342
Name
(GenBank) Putative formate dehydrogenase
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
rfu Roseobacter fucihabitans
Pathway
rfu00630
Glyoxylate and dicarboxylate metabolism
rfu00680
Methane metabolism
rfu01100
Metabolic pathways
rfu01120
Microbial metabolism in diverse environments
rfu01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ROLI_004310
09102 Energy metabolism
00680 Methane metabolism
ROLI_004310
Enzymes [BR:
rfu01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
ROLI_004310
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_8
Fer4_9
Fer4_6
Fer4_21
Fer4_16
Fer4_Nqo3
Fer4_10
Fer4_4
Fer4_2
Fer4_22
Fer2
Fer4_17
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
WVX47364
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Position
433263..436025
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AA seq
920 aa
AA seq
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MSGKITFIMDGQEVQAEAGLTIWEVANGRGLVIPHLCHKPAPGYRPDGNCRACMVEIEGE
RTLAASCIREPSDGMVVTTNSARAESARKMVVEMLVTDQPEQDVAHDKSSHLWDMAELNG
VSQSRFPKLEEGRIPLLDDSHVAMSVNLDACIQCGLCVRACREVQVNDVIGMSGRGHDSY
PTFDMADPMGDSTCVACGECVQACPTGALMPATVVDENQVGDSADFDSEVESICPFCGVG
CQVSLKVKDGKVKYVDGINGPANEGRLCVKGRFGFDYIHHPHRLTKPLIRRDDAPAKGLN
VDPGNWQTHFREATWDEALDFAAAGMKGRGREIAGFGSAKCTNEEAYLFQKMIRQGFGHN
NVDHCTRLCHASSVAALMENVGSGAVTATFNEIENADVAIAIGCNPIENHPVAATFFKQF
TKRGGKLIVMDPRGQALKRFASHMLQFRPGADVSMLNAIMHVIVEEGLYDQQYIDAYTEN
WEAEKAHLADFSPEAMAPICGIEPDVLRDVARTFAGAKAAMIFWGMGISQHIHGTDNSRC
LISLALMTGQVGRPGSGLHPLRGQNNVQGASDAGLVPMFLPDYQPVTDDGVRSAFTKVWG
SADFSNERGLTVTEIMDAVHADKIKGMYILGENPAMSDPDVEHARDALAKLDHLVVQDIF
ITETANYADVILPASAFAEKSGTVTNTNRQVQMGRAAVSPPGDAREDWWIEVELAKRLGL
GWSYDSPADVFAEMKQNMRSLENITWNRLAEQNAVTYPSLSPEDPGQAIVFGDGFPRPEG
RAKFTPASVIAPDDVPDAEYPMILTTGRQLEHWHTGSMTRRSAVLDGLEPEANCSLHPST
LRKLGVAPGEHVLLTTKRGSISIMAREDRAVSPDMVFVPFAYVEAAANILTNPAVDPYGK
IPEFKFSAVRVEKAVQVAAE
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcaaaattacctttatcatggacggtcaggaagtgcaggccgaggccggcttg
accatttgggaagtcgcaaatggccgcgggcttgtgatcccgcatctgtgccacaagccc
gcgccagggtatcgcccggatggcaattgccgcgcctgtatggtcgagattgagggcgag
cgcaccttggcggcctcctgcattcgcgaacccagcgacgggatggttgtcacgaccaat
tctgcccgcgccgagagcgcgcgcaagatggttgtcgagatgcttgtgacggatcagccc
gagcaggacgtggcccatgataaatccagccacctgtgggatatggccgaattgaacggc
gtatcacaaagccgttttccgaaactcgaagagggtcgcatcccgttgttggatgacagc
cacgtggcgatgagcgtcaatctggacgcttgtatccaatgcgggctgtgcgtgcgggct
tgccgcgaagtgcaggtcaacgacgtgatcggtatgtccggacgcgggcatgattcatac
cccacatttgatatggccgacccgatgggggacagcacctgtgtggcttgcggtgaatgt
gttcaggcctgcccgaccggggccttgatgcccgcgacggtggtggatgaaaatcaggtg
ggggatagcgcggattttgacagtgaggtcgagagcatttgcccgttctgcggggtcggc
tgtcaggtgtcgctcaaggtcaaggacggcaaggtgaaatatgtcgacgggatcaacggt
ccggcgaatgaaggccgcctctgcgtcaagggacggtttgggtttgactatatccaccac
ccgcaccgtttgaccaagccactgatccgccgcgatgatgcgcccgccaagggcctgaac
gtcgatccgggcaattggcaaacgcatttccgcgaggcgacatgggacgaggcattggat
ttcgccgccgcgggtatgaagggccggggccgtgaaatcgcgggtttcgggtcggccaaa
tgcaccaatgaggaggcctatctgttccagaaaatgatccgtcaggggtttgggcataat
aatgtcgaccactgcacgcgactgtgtcatgcgtcctccgttgccgcgctgatggaaaac
gtcggttccggggctgtgacggccacattcaatgagatcgaaaacgcggatgtggccatc
gccatcggttgtaatcccatcgaaaatcaccctgtcgcggcgacgtttttcaaacaattc
accaaacgcggtggcaaactgatcgtgatggacccgcgcggtcaggcgctcaagcgtttc
gccagccacatgctgcaattccgccccggcgcggatgtgtcgatgctgaatgcgatcatg
catgtgatcgttgaggaaggcctttacgatcagcaatatatcgacgcctacaccgaaaac
tgggaggccgaaaaagcgcatctggcggatttttcacccgaggcgatggccccgatttgt
ggtattgaaccagacgtgctgcgcgatgtcgcccgtacctttgccggtgccaaagcggcg
atgatcttttggggtatgggcatcagccagcatatccatggcacggataattcgcggtgt
ctgatttcgctggcgctgatgaccgggcaagtggggcgtccgggttccggcctgcacccg
ttgcggggtcaaaacaacgtgcagggcgcgtctgatgctggtctggtgccgatgttcctg
ccggattaccagccggtgacggatgacggcgtgcgctcggctttcaccaaagtctggggc
tctgcggatttctccaacgaacgcggattaaccgtgacggaaatcatggacgcggtgcac
gcagataagatcaagggcatgtatatcctgggcgaaaaccctgcgatgtcggacccggat
gtggaacatgcgcgcgacgccttggcgaaactcgaccatctggtggtgcaggatattttc
atcaccgaaaccgcgaattacgcggatgtgatcctgcccgcgagcgcctttgccgagaaa
tccggcaccgttaccaataccaaccgacaggtgcagatgggacgtgctgccgtgtcccct
cccggtgatgcgcgcgaggattggtggatcgaggtggaattggcgaaacgtctggggcta
ggctggtcttatgatagccccgcggatgtattcgctgagatgaagcagaacatgcgctct
ctggagaacatcacctggaaccggttggcggaacaaaacgcggtcacctacccctcgctc
agccccgaagatcccggtcaggcgatcgtgttcggcgatggcttcccacgtcccgagggg
cgcgcgaaattcaccccggccagcgtgattgcacctgacgatgtgcccgacgcggaatac
ccgatgatcctgaccaccgggcgacaattggaacattggcacaccgggtcgatgacgcgg
cgttctgcggtgcttgatgggttggagccggaagcgaactgctccttgcatccctcgacc
ttgcgtaaactgggcgtggcgccgggcgagcatgtgcttttaacgaccaagcgtggcagc
atttcgatcatggcgcgcgaagaccgggcggtctcaccggatatggttttcgtgccgttt
gcctatgtggaagcggcagcgaatattctgaccaatccggcagttgatccctacggaaag
attccggagtttaaattctccgcggtcagggtggaaaaggcagtgcaggtggcggccgag
tag
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