Roseobacter fucihabitans: ROLI_005490
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Entry
ROLI_005490 CDS
T10342
Name
(GenBank) hypothetical protein
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
rfu Roseobacter fucihabitans
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfu03000
]
ROLI_005490
Transcription factors [BR:
rfu03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
ROLI_005490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_N
TetR_C_13_2
TetR_C_13
Motif
Other DBs
NCBI-ProteinID:
WVX47481
UniProt:
A0ABZ2BNM9
LinkDB
All DBs
Position
549634..550227
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AA seq
197 aa
AA seq
DB search
MARPREFDPEDAIKRATGVFWQKGYLEASLPDLLEGMGLTRGSLYKAFKDKKTLFLLVLA
HYQDEAVGAAQARLTNPQVPDGRLRILSLFQALATAVAAGDARGCLLCSAAAGYEMSDPE
IAAAVEQGMEGIRAGLEAALRDSLTHADQSKEAQRALANMLLTQYIGLCVLARSRMSLGV
IEQCTGHVAQLLGLERA
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggcacgacccagagagttcgaccccgaggatgcgatcaaacgggcgacgggtgtattt
tggcaaaagggctatctggaggcatcgcttccggatctgctggagggtatgggactgacg
cgtggcagcctctacaaggccttcaaggacaaaaagaccctttttctgctggttcttgcg
cactaccaggatgaagcggtcggggcggctcaggcgcggctgaccaatccgcaggtgcct
gatgggcggctcaggatcctgagcctgtttcaggcgctggccacggctgtggcagcgggg
gatgcgcgggggtgtctgttgtgctcggcggcggcgggctatgaaatgtccgatccggaa
attgcggcagccgtggagcagggtatggagggcatccgcgccgggttggaggcggcgctg
cgggactcactgacacatgcggaccaatccaaggaggcacagcgcgccctggcaaacatg
ctcctgacgcaatatatcggtctgtgcgttctggcccggtcgcgcatgtcgctgggcgtg
atcgagcaatgcacgggccatgttgcgcagttattgggcctggagcgcgcgtaa
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integrated database retrieval system
