Roseobacter fucihabitans: ROLI_007260
Help
Entry
ROLI_007260 CDS
T10342
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rfu Roseobacter fucihabitans
Pathway
rfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ROLI_007260 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfu03019
]
ROLI_007260 (groL)
03110 Chaperones and folding catalysts [BR:
rfu03110
]
ROLI_007260 (groL)
03029 Mitochondrial biogenesis [BR:
rfu03029
]
ROLI_007260 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rfu04147
]
ROLI_007260 (groL)
Enzymes [BR:
rfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ROLI_007260 (groL)
Messenger RNA biogenesis [BR:
rfu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ROLI_007260 (groL)
Chaperones and folding catalysts [BR:
rfu03110
]
Heat shock proteins
HSP60 / Chaperonin
ROLI_007260 (groL)
Mitochondrial biogenesis [BR:
rfu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ROLI_007260 (groL)
Exosome [BR:
rfu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ROLI_007260 (groL)
Exosomal proteins of other body fluids (saliva and urine)
ROLI_007260 (groL)
Exosomal proteins of breast cancer cells
ROLI_007260 (groL)
Exosomal proteins of colorectal cancer cells
ROLI_007260 (groL)
Exosomal proteins of bladder cancer cells
ROLI_007260 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
ChlI
Motif
Other DBs
NCBI-ProteinID:
WVX47655
UniProt:
A0ABZ2BQB8
LinkDB
All DBs
Position
706779..708422
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFDTDARNKMLKGVNILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIVKEGMKSVAAGMNPMDLKRGI
DLATAKVVEAIKAAARPVSDSDEVAQVGTISANGESEIGQQIADAMQKVGNEGVITVEEN
KGLETETDVVEGMQFDRGYLSPYFVTNADKMTTELEDCIVLLHEKKLSSLQPMVPLLEQV
IQSQKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDLAILTGGQV
ISEDLGMKLESVTMDMLGSAKKVQITKDETTIVDGAGEKAEIEARVTQIRTQIEETTSDY
DREKLQERVAKLAGGVAVIRVGGMTETEVKERKDRVDDALNATRAAVQEGIVVGGGVALV
QAGKTLSDLKGANSDQDIGISIIRKALEAPLRQIAENSGVDGSVVAGKIRESDDPKFGFN
AQTEEYGDMFAFGVIDPAKVVRHALQDAASIAGLLITTEAMVADKPAKEGAPAGGGMPDM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaggacgtcaaattcgacaccgacgcccgcaacaaaatgctcaagggtgtg
aacatcctggcaaatgcggtaaaagtcacgctgggcccgaaaggtcgtaacgtggttctg
gacaaatctttcggcgctccgcgcatcaccaaagatggtgtatccgtggcgaaagagatc
gaactggaagataagttcgagaatatgggcgcacagatggtcaaggaagttgcttcccga
accaacgacgaagcaggcgacgggacaaccacggcgactgttttggcccaggccatcgtc
aaagaaggcatgaaatcggttgcggctggcatgaacccgatggatctcaagcgcggcatc
gatctggcgacagcgaaagtcgtcgaagcgatcaaagcggcggcgcgtcctgtttcggac
agcgacgaagttgcgcaggtcggtacgatttccgccaatggcgaatctgagatcggtcag
caaatcgcggatgcgatgcagaaagtcggcaatgagggtgtgatcaccgtcgaagagaac
aaaggtctggaaacagaaacagacgttgttgaaggcatgcagttcgaccgcggttacctg
tcgccttactttgtcaccaacgccgacaagatgacaaccgagctggaagactgcatcgtc
ttgttgcacgagaagaagctgtcttctttgcagcccatggtgccgctcctggagcaggtc
attcagtcgcaaaagccactgctgatcatcgcagaagacgttgagggcgaagccctggcg
acattggttgtgaacaaattgcgtggcggtctgaaaatcgcagcggtcaaagcacctggt
ttcggcgatcgtcgcaaagccatgttgcaggaccttgcgatcctcacaggtggtcaggtg
atttccgaagatctgggcatgaagcttgagtccgtcacaatggacatgctggggtctgcc
aagaaggttcagatcaccaaggacgagaccacaatcgttgacggtgccggtgagaaagcc
gagatcgaagcacgcgtgacgcagatccgtacgcagatcgaagaaaccacatccgattat
gaccgtgaaaagctgcaagagcgtgttgccaaattggcaggcggtgttgctgtgatccgc
gtcggcggcatgacagaaaccgaagtcaaagagcgtaaagaccgcgttgatgatgcgctg
aacgccacacgtgcggctgttcaggaaggtatcgtcgtgggtggtggtgttgcactggtt
caggccggtaaaacgctcagcgacctcaagggtgcgaactccgatcaggacatcggtatt
tcgatcatccgtaaagcgctcgaagcaccgctgcgtcagatcgcagagaactctggtgtt
gacggttccgttgtcgcgggcaaaatccgtgaaagcgacgatcccaagttcggctttaac
gcgcagaccgaagaatatggtgacatgttcgctttcggtgtgattgatccagccaaagtg
gtgcgtcatgcattgcaggatgcagcctccatcgccggtctgttgatcacaacagaagcc
atggttgcagataagcccgccaaagaaggcgcgcctgccggtggtggcatgcccgacatg
ggcggcatgggcggcatgatgtaa
DBGET
integrated database retrieval system
