Roseobacter fucihabitans: ROLI_010800
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Entry
ROLI_010800 CDS
T10342
Symbol
nagR_2
Name
(GenBank) HTH-type transcriptional repressor NagR
KO
K03710
GntR family transcriptional regulator
Organism
rfu Roseobacter fucihabitans
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfu03000
]
ROLI_010800 (nagR_2)
Transcription factors [BR:
rfu03000
]
Prokaryotic type
Helix-turn-helix
GntR family
ROLI_010800 (nagR_2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_Crp_2
HTH_DeoR
LexA_DNA_bind
MarR
HTH_24
HTH_41
Rrf2
RepL
HTH_IclR
HTH_69
Motif
Other DBs
NCBI-ProteinID:
WVX48002
LinkDB
All DBs
Position
complement(1063766..1064473)
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AA seq
235 aa
AA seq
DB search
MVRSSQNANALPKYVQLSELLARDIDAGRLLDGERLPPEREMAATLGTSIGTLRKALAAL
ENKGLLRRVQGSGNYIRKSAAAAGAYPMFRLELLSGGGLPSAEVLGLHVMQKPRGLPAFG
HSSSATRIRRRRYLNDVAIAVEEIWLDAAVGVLDTADLSDSLYQTYLKQLHFWITRAEDR
VSISALPAWTPLDFGHPRTACGYIERFSWADQPTAIEFSRTWFDTTKSVYVQRLK
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggtcagatcatcacaaaatgccaatgcgcttccgaaatacgtgcaattgagcgagttg
ctggcgcgcgacatcgatgcggggcgtttgctggatggggaacgcctgccgcccgagcgc
gagatggccgcgacattgggcacctccatcgggacgctgcgcaaagcccttgcagcgctg
gaaaataaaggcttgctgcggcgcgtgcaggggtcgggcaactacattcgcaaatcggcc
gccgccgcgggggcctatccaatgtttcgactggaactgctctcgggtggtgggttgccg
agcgctgaagtgttaggcctgcatgtcatgcaaaaaccaaggggtttaccggcgtttggc
cacagttcaagcgccacccgtatccggcgacgccgctatctcaatgatgtagcaatcgcc
gtggaagaaatctggctcgacgccgccgtcggcgttttggataccgcggatctgtccgat
tccctctaccagacctatctcaagcaattgcatttctggatcacgcgcgccgaagatcgc
gtcagcatcagcgccctgcccgcatggacaccgcttgatttcggacacccccgaacggcc
tgcggctatatcgaacggttcagctgggcggatcaacccacggccatagagttttcacgc
acgtggtttgacacgacaaaatccgtctatgtacagcggttgaaatag
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integrated database retrieval system
