Roseobacter fucihabitans: ROLI_012530
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Entry
ROLI_012530 CDS
T10342
Symbol
rhlE_1
Name
(GenBank) ATP-dependent RNA helicase RhlE
Organism
rfu Roseobacter fucihabitans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
ERCC3_RAD25_C
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WVX48175
LinkDB
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Position
complement(1237545..1239023)
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AA seq
492 aa
AA seq
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MTKFSDLNLNPKVLKAIQEAGYESPTPIQAGAIPPALAGKDVLGIAQTGTGKTAGFVLPM
ITLLARGRARARMPRSLVLCPTRELAAQVAENFDTYSKHLKLTKALLIGGVSFKEQDTLI
DKGVDVLIATPGRLLDHFERGKLILSDVKLMVVDEADRMLDMGFIPDIERIFGLTPFTRQ
TLFFSATMAPEIERITNTFLSAPERIEVARQATTGENITQGVVMFKGSRKDREATEKRKV
LRGLIDAEGDKCTNAIVFCNRKVDVDIVAKSLTKYGYDAAPIHGDLDQSQRTRTLDGFRE
GTLRFLVASDVAARGLDVPAVSHVFNFDVPSHAEDYVHRIGRTGRAGRDGKAIMICIPRD
EKNLVDIERLVQREIPRLDNPVAQGTQEAEAPAETPEEKPKRTRSRIRKKDDAPKAAQVE
EQVSKPTEQQVAESTPPAPEPVAEEPKRNNRSRSSGRGRSSDNDRGGNKIVGLGDHTPEF
IGLSFKERSAAH
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaattttctgacctaaacctgaatcctaaagtcctgaaagccattcaggaagcg
ggctatgaaagccctacacccatccaggccggtgccatcccacccgcgctggcgggaaaa
gacgtgttgggcatcgcccagaccggtaccggcaaaaccgcgggcttcgtcttgccaatg
atcaccctgttggcacgcggacgcgcacgggcgcggatgccgcgctctctggtgctctgc
ccaacgcgcgaactcgccgcacaggtggcggaaaacttcgacacctattccaaacatctg
aagctgacaaaggctctgctgatcgggggcgtgtctttcaaggaacaggatacgctgatc
gataagggcgtggatgtcctgatcgcgacaccgggtcggttgctcgatcatttcgaacgc
ggcaaattgattctgtcggatgtgaaactgatggtcgtggatgaggctgaccgaatgctc
gacatggggttcatcccggatatcgaacgcattttcggcctcactcctttcacgcgccag
acgctgtttttctccgccacgatggcgcctgaaatcgaacggatcaccaatacgttcctc
tccgcgcccgaacggatcgaagtcgcgcgccaggccacgaccggcgagaacatcacccag
ggcgtggtcatgttcaagggcagccgcaaggaccgtgaagccaccgaaaagcgcaaggtt
ttgcgcgggctgatcgacgcagagggcgataaatgcaccaatgcgatcgttttttgcaac
cgcaaggtcgatgtggacatcgtcgccaaatcgctgacgaaatacggctatgacgccgcg
ccgatccacggagatctggatcaaagccagcgcacgcgcacgcttgatggcttccgcgaa
ggcacattgcggtttctcgtggcctctgatgtggccgcgcgcgggcttgatgtgcctgcg
gtgagccatgtgttcaactttgacgtgccaagccatgcagaggattatgtccaccggatc
gggcgcacggggcgtgcgggtcgggatggcaaagcgatcatgatttgcattccgcgcgac
gaaaagaacctggtggatattgaacgtctggtgcagcgggaaatcccgcgtctcgacaat
ccggtcgcgcaagggactcaagaggccgaggcccccgccgaaactccggaggaaaaaccc
aaacgcacgcggtcgcgcatccgcaagaaagacgatgcacccaaggcggcccaggttgag
gagcaagtgtccaaacccacagaacaacaggtggcggaaagcacaccgccggcacccgaa
cccgtggcggaagagccaaaacgcaacaatcgcagccgatcctctggtcggggccgatct
tctgacaacgatcgcggcggcaacaagatcgtcggcctgggcgatcacacccccgaattt
attgggctcagcttcaaggaacgcagcgcggcgcattga
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