Roseobacter fucihabitans: ROLI_013450
Help
Entry
ROLI_013450 CDS
T10342
Symbol
lsrD_1
Name
(GenBank) Autoinducer 2 import system permease protein LsrD
KO
K10440
ribose transport system permease protein
Organism
rfu Roseobacter fucihabitans
Pathway
rfu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ROLI_013450 (lsrD_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfu02000
]
ROLI_013450 (lsrD_1)
Transporters [BR:
rfu02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
ROLI_013450 (lsrD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
HIT-like
Motif
Other DBs
NCBI-ProteinID:
WVX48265
LinkDB
All DBs
Position
1331075..1332076
Genome browser
AA seq
333 aa
AA seq
DB search
MKPGTLSKALKSGAIWGFIVLELIFFSIAGEFLSLSDKAFMDWENMLLLLKQSAPIGIIA
IGMTIVMVNGNIDLSVGATYAIAAIVLLDSMTWPIFAGLGDWVIPVSWLLALAVGTVLGA
INGLIVWKTGVDAFIVTLGAMLGYRGIVFMFNGEQPTSHLNWTLVDFAEAEFLGLATASW
FLLVVTVAIWFLMTKTVHGRNAYAIGDNREAAVNAGIRVGPHIMINFAIIGFLAALSAVV
FYSESGSVNPNDGQLYELWVITAVVLGGTKITGGAGSVIGTFGGVIAIQLLRKGLGHIGA
DTSTVNLVIGLILIVVLILDRQLNVKGKEELKV
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgggaacactgtccaaagctctgaaaagcggcgcgatctgggggttcatcgtg
ctggagctgattttcttcagcattgcaggtgaattcctgtctctgtcggacaaagccttc
atggattgggaaaatatgctgttgctgctcaagcagtccgccccgatcgggatcatcgcc
attggcatgaccattgtgatggtcaacggaaatatcgacctcagcgttggtgcgacctat
gccatcgcggcaatcgtgttgctggacagcatgacctggccgattttcgcaggacttggg
gactgggttattccggtgtcctggttgctggcactggcggtgggcaccgtgctcggtgcg
atcaacggcctgattgtgtggaagacaggagttgacgcttttatcgtcacgctcggcgct
atgctgggctatcgcggcatcgttttcatgttcaacggggaacagccgaccagccattta
aactggaccctcgttgattttgccgaggccgagtttctggggcttgcaacggcatcctgg
ttcttgctggtggtaacagttgcgatctggttcttgatgaccaagactgtacatggccgc
aacgcctacgccatcggagacaaccgcgaggcggcggtgaacgcaggcatcagggttggt
ccgcacattatgatcaacttcgccatcattggctttctggcggcgctatcggctgtggtg
ttttactcggaaagcggctcggtgaaccccaacgatggccaactctacgagctttgggtg
atcacggcggttgtacttggtggcacgaagatcaccggtggcgcaggcagtgtaatcggc
acctttggcggtgtcatcgccatccagctgctacgcaaggggctgggccatatcggcgcg
gacacctcaaccgtgaaccttgtgattggtctgatcctgatcgtcgtgctgatcctggat
cgccaattgaatgtaaaaggcaaagaggagttgaaggtatga
DBGET
integrated database retrieval system
