Roseobacter fucihabitans: ROLI_019070
Help
Entry
ROLI_019070 CDS
T10342
Symbol
ihfA
Name
(GenBank) Integration host factor subunit alpha
KO
K04764
integration host factor subunit alpha
Organism
rfu Roseobacter fucihabitans
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfu03032
]
ROLI_019070 (ihfA)
03036 Chromosome and associated proteins [BR:
rfu03036
]
ROLI_019070 (ihfA)
03400 DNA repair and recombination proteins [BR:
rfu03400
]
ROLI_019070 (ihfA)
DNA replication proteins [BR:
rfu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ROLI_019070 (ihfA)
Chromosome and associated proteins [BR:
rfu03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ROLI_019070 (ihfA)
DNA repair and recombination proteins [BR:
rfu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ROLI_019070 (ihfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_bac_1
HU-CCDC81_euk_1
TPR_26
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
WVX48824
LinkDB
All DBs
Position
complement(1930662..1930964)
Genome browser
AA seq
100 aa
AA seq
DB search
MAEKTLTRMDLSEAVFREVGLSRNESAQLVESVLEHLSDALVRGEQVKISSFGTFSVRDK
SARIGRNPKTGEEVPINPRRVLTFRPSHLMKDRVADGNKS
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaagactttgacacgaatggatctgagtgaggccgtcttccgcgaagtgggt
ttatcgcgcaacgaaagcgcgcagcttgtcgaatcggtgctggagcatctgtcggacgcg
ttggtacggggcgagcaggttaaaatctcttcatttggaaccttttccgtacgcgataag
tcggcccgtatcgggcggaacccgaaaaccggcgaagaagttccaatcaatccgcgccgc
gttctgaccttccgcccctcgcacctgatgaaggatcgcgtggcagacgggaacaagtcc
tga
DBGET
integrated database retrieval system
