Roseobacter fucihabitans: ROLI_020580
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Entry
ROLI_020580 CDS
T10342
Symbol
lptB_1
Name
(GenBank) Lipopolysaccharide export system ATP-binding protein LptB
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
rfu Roseobacter fucihabitans
Pathway
rfu02010
ABC transporters
rfu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ROLI_020580 (lptB_1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ROLI_020580 (lptB_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfu02000
]
ROLI_020580 (lptB_1)
Transporters [BR:
rfu02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
ROLI_020580 (lptB_1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BCA_ABC_TP_C
AAA_21
AAA_23
SMC_N
AAA_29
AAA
AAA_15
RsgA_GTPase
AAA_30
Mg_chelatase
MMR_HSR1
SRP54
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
WVX48973
UniProt:
A0ABZ2BTC3
LinkDB
All DBs
Position
complement(2067556..2068338)
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AA seq
260 aa
AA seq
DB search
MIVVDDIHKHFGGFHAVDGATLEIAQGSITGLIGPNGAGKTTLFNVIAGVLQPTSGRVSM
AGEDITGLPPHELFHKGLLRTFQIAHEFSSMTCRENLMMVPGAQSGETLWNTWFGRKRIA
DEERALRAKADEVLEFLTVAHLADHRAGQISGGQKKLLELGRTMMVDAKIVFLDEVGAGV
NRTLLNTIGDAIIRLNKERGYTFVVIEHDMDFIGRLCDPVICMAEGRVLAQGTLDDIKAN
EQVIEAYLGTGLKNKDKVGA
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgttgacgatattcacaaacacttcggcggtttccacgccgttgacggtgcc
acgttggagatcgcgcaaggctcgattaccggcttgattggccccaatggcgcgggaaaa
accacacttttcaacgtgatcgcgggcgttcttcaacccacttcgggccgggtcagcatg
gcgggagaagacatcaccggcctgcccccgcatgaattattccacaaaggccttttgcgt
acctttcagatcgcgcatgagttttcctccatgacctgtcgcgaaaatctgatgatggtg
ccaggggcgcaatcgggtgaaacgctctggaacacctggttcgggcgcaagcgcattgcc
gatgaggagcgcgcgctgcgtgccaaggccgatgaggtgctggaattcctgaccgtcgcg
catctggccgatcaccgcgcgggccagatttccggcgggcagaaaaagctgctcgaactc
gggcgcaccatgatggtggatgcaaaaatcgtctttctggacgaggtcggcgcgggcgtg
aatcgcacgctgctcaacaccatcggcgatgcgatcatccgcctgaacaaggagcgcggc
tatacctttgtggtgatcgagcatgacatggatttcatcgggcgcttgtgtgatccggtg
atctgcatggctgaagggcgcgtgttggcgcaaggaacattggatgacatcaaggccaac
gagcaggtgatcgaggcttatctcggcaccggcctgaagaataaagacaaggtgggcgca
tga
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