Roseobacter fucihabitans: ROLI_023570
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Entry
ROLI_023570 CDS
T10342
Symbol
xerD_1
Name
(GenBank) Tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
rfu Roseobacter fucihabitans
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rfu03036
]
ROLI_023570 (xerD_1)
Chromosome and associated proteins [BR:
rfu03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
ROLI_023570 (xerD_1)
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_5
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
WVX49268
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All DBs
Position
2357961..2358929
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AA seq
322 aa
AA seq
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MARTHWISAFLEAQAAELGAARNTLLAYGRDLKDFESWLARQDNGFETVGKQDVETYLVY
CDAQGLSKATRARRLSAIKQLYRFAFEEGWRNDNPAIQISGPGRDKRLPKTLSEAEVDRL
LEAARASARKAADRVRNTCLMELLYATGMRVSELVGLPVSAARGDPRMLLIIGKGGKERM
VPLSPPAREALAAWLKLRDAKDDARRATGKPPSKYLFASGSAAGHLTRHRFYLLIKEFAV
AAGVSPGKVTPHTLRHAFATHLLANGADLRSIQTLLGHADVATTEIYTHVLEARLSDLVL
THHPLANDAPRKARGKTSSDGQ
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcacccattggatttccgcctttctggaggcgcaggccgcagagttgggggcc
gcgcgcaacacgcttttggcctatggccgcgacttgaaggacttcgaaagctggctggcg
cgacaggacaacggttttgagaccgttggcaagcaagacgttgaaacctatcttgtgtat
tgcgatgcccaaggactgtccaaagccacccgcgcccgccgcctgtcagcgatcaaacag
ctgtaccgctttgcttttgaggaaggctggcgcaacgacaatccggcaatccaaatctcg
ggccccggacgtgacaagcgtctgcccaagacgctgtcggaggcggaggttgatcgcctt
ctggaggccgcgcgcgcctcggcgcgcaaggcggcggaccgggtgcgcaacacctgcctg
atggagttgctctatgcgaccggcatgcgtgtttctgaactggtcggcctgccggtcagc
gccgcgcggggcgatccgcgcatgttgctgatcatcggcaaggggggcaaggagcgtatg
gtgccgctgtccccgcctgcgcgtgaagccctcgcggcctggctaaaactgcgcgacgcg
aaagatgacgcacgccgcgcgacgggcaaaccgccttcaaaatacctctttgcctccggg
tctgcggcgggtcacctcacgcggcaccgcttttatctgttgatcaaggagtttgccgtg
gccgccggcgtctcgcccggcaaagtcacaccgcatacattgcgccatgcctttgccacc
catctgctggccaatggggctgatctgcgctccatccagacattgctgggccacgccgat
gtggcaacgacggaaatctatacccatgtgctggaagcgcgactgtcagacctggtgctg
acccatcacccgctggccaatgatgccccccgcaaggccaggggcaaaacatcctcagac
ggccagtaa
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