Roseobacter fucihabitans: ROLI_025270
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Entry
ROLI_025270 CDS
T10342
Name
(GenBank) hypothetical protein
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
rfu Roseobacter fucihabitans
Pathway
rfu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ROLI_025270
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rfu01007
]
ROLI_025270
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rfu03016
]
ROLI_025270
Enzymes [BR:
rfu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
ROLI_025270
Amino acid related enzymes [BR:
rfu01007
]
Aminoacyl-tRNA synthetase
Class I (U)
ROLI_025270
Transfer RNA biogenesis [BR:
rfu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
ROLI_025270
Prokaryotic type
ROLI_025270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1e
tRNA-synt_1_2
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
WVX49433
LinkDB
All DBs
Position
2523516..2526743
Genome browser
AA seq
1075 aa
AA seq
DB search
MGAAMPMEKKFDANEAEARLYAAWEQAGAFKAGANATRDETFSIMIPPPNVTGSLHMGHA
FNNTLQDILVRWHRMRGFDTLWQPGTDHAGIATQMVTEREMAANGEGTRREMGREKFVER
VWEQKVKSRGTIIGQLKRLGASCDWSREAFTMGGAPGDPDAGTGPNFHDAVIKVFVQMYN
DGLIYRGKRLVNWDPHFETAISDLEVENIEVDGHMWHFKYPLAGGATYEYVEKDEDGNVT
LRQTRDYISIATTRPETMLGDGAIAVHPSDERYAPIIGKLCEIPVGPKEHRRLIPIITDE
YPDKDFGSGAVKITGAHDFNDYQVAKRNDIPLYRLLDTSGHMRSDGAPYAEAAAIAMKVA
QGERTLTETEADAINLVPDDLRGLNRFCVKGQDSGPQAREQVVSQITDEGLAVMVAADIL
EPGTTSATAPSSGLTRGSPDADAAMPEPDIPGQAGDAWVPLVEKKKIMQPFGDRSKVVIE
PMLTDQWFVETSKIVQPAIDAVRDGDVAILPEQDKKVYFNWLENIEPWCISRQLWWGHQI
PVWYGPPKVIAESLKNGLPETEFDSRLEPVLFCGSNLEEIRSQALDFYGTEIEIVISETG
TEYFDVDGRQRSTQGGGYYWWDETEKTGFLELSRDPDVLDTWFSSGLWPIGTLGWTGDAA
QDAANEALQKYFPTSTLITGFDIIFFWVARMMMMQYAVTGQKPFSTVYVHALVRDEKGKK
MSKSVGNVIDPLDMIDEFGADAVRFTLTSMAAMGRDLKLSTQRIAGYRNFTTKLWNAASF
GERHNVHTIPHRDTPPMATIALNKWIIGEVAKVREEVDASLNAYRFNDAANGLYAFVWGV
FCDWYLELSKPVFEGNDPTAAQETREVYAWALDQCLILLHPIMPFVTEELWGLKQRPCML
VHADWPTYTAADLVDANADGELNWTIALINAIRSARAQMHVPAGAYVPLVVVGFETPARA
AFDANEAMIKRLARVETMMEVETFPKGCAALGVTGGSFGLPLADIIDVAEEKARLQKTLD
KLGKELGGLRGRLKNPKFAASAPEDVVAETRKNLALREAEEGKLREALARLAELG
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccgcgatgccgatggaaaagaaatttgacgcaaacgaagccgaagcacgcctt
tacgccgcctgggaacaggccggggctttcaaggcgggggccaatgccacgcgcgatgaa
accttttccatcatgatccccccgcccaatgtgacgggatcgctgcacatggggcacgcg
ttcaacaacacgctacaggacatcttggtgcgctggcaccggatgcgcggtttcgacacg
ctctggcaaccgggcacggatcacgcgggcatcgccacgcagatggtcacggagcgcgag
atggccgcgaacggcgaaggcacccgccgcgaaatggggcgcgagaaattcgtcgagcgt
gtctgggagcagaaggtcaaatctcgcggcacgatcatcgggcaattgaaacggcttggc
gcatcctgtgactggtcgcgcgaggcctttaccatgggcggcgcgccgggggatccggac
gcaggcacaggtccaaatttccacgatgcggtgatcaaggtctttgtgcagatgtataat
gacgggttgatctatcgcggcaagcggctggtcaattgggacccgcatttcgagacggca
atctccgatcttgaggtcgagaatatcgaggtcgatggccatatgtggcacttcaaatac
ccgctcgcgggcggtgccacctatgagtatgtcgagaaggatgaagacggcaacgtcacc
ctgcgccagacgcgggattatatttcaattgccaccacgcgccccgaaaccatgctgggg
gatggcgcgattgcggttcatccatcggacgaacggtatgcgccaatcatcggaaaactt
tgtgaaattcctgttggccccaaagagcatcgccgcctgatcccaatcatcaccgatgaa
tacccggataaggatttcggttccggcgcagtgaagatcaccggcgcgcatgacttcaat
gactaccaggtggccaagcgcaacgacattccgctgtatcgcttgcttgataccagcgga
catatgcgcagcgacggtgcgccctacgccgaagccgccgcgatcgcgatgaaagtcgcg
caaggtgaacgcaccctcaccgagactgaagccgacgcgatcaatctggtgccggatgat
ttgcgcggcttaaatcgtttttgtgtcaaagggcaagacagcggccctcaagcccgcgag
caggtcgtgagccaaatcaccgatgaaggcctcgctgtcatggtcgctgccgatattttg
gaacccggcaccacatccgcaaccgcgccatcctcgggcttgacccgaggatctccggac
gcggacgccgcgatgccagagccggatatccccggtcaagccggggatgcgtgggttcca
ttggtcgagaaaaagaagatcatgcaaccctttggcgaccgctccaaagtggtcattgag
ccgatgctgacagaccaatggtttgtagagacctccaagatcgtgcagcccgcgattgat
gcggtgcgggacggcgacgtcgcgatcctgcccgagcaggacaagaaggtctatttcaac
tggcttgaaaatattgagccttggtgcatctcgcgccagctgtggtgggggcatcagatc
ccggtttggtatgggccgccgaaagtgatcgctgaaagcctaaaaaacggtctgcctgaa
actgaatttgacagccgtttggaacccgttttattttgcggatcaaatttggaggaaatt
cgcagtcaagcgttggacttttacggtaccgaaattgaaatcgttatttccgagactgga
actgaatactttgatgtcgatggccgccaacgctcaacacagggtggaggttactattgg
tgggatgaaaccgagaaaaccggctttttagaactatcccgcgaccctgacgtcctggac
acatggttctcctccggcctttggcccattggcacactaggctggacgggcgacgcggcc
caggacgccgcaaacgaagcactacagaaatacttccccacctcaaccctgatcaccggc
tttgacatcatcttcttctgggtcgcgcggatgatgatgatgcaatatgccgtgacgggg
caaaagccgttcagcaccgtctatgtccacgcactggtgcgtgacgagaagggcaagaaa
atgtccaaatcggtcggcaatgtcatcgacccgctcgacatgatcgacgagttcggcgcg
gatgccgtgcgcttcacgctgacgtcgatggccgccatggggcgcgaccttaagctcagc
acgcaacgcattgcaggctatcgcaatttcactaccaaactgtggaacgccgcctcattc
ggcgagcgccataatgtccacacgattccgcatcgcgacacgccgccgatggcaacaatc
gcgctcaacaaatggatcatcggtgaggtcgcaaaggtgcgcgaggaggtggacgcgagc
ctcaacgcctatcgtttcaacgatgcggccaatgggctttatgcctttgtctggggcgtg
ttttgcgactggtatctggaactcagcaagccagtgtttgagggtaatgacccgacggcg
gcacaggaaacccgcgaagtctacgcctgggcgctggatcaatgcctgatcctgctgcac
ccgatcatgccctttgtcaccgaggaactttggggcctcaagcagcgcccttgcatgttg
gtgcacgcggattggcccacatataccgccgccgacctcgtggacgcgaatgcagacggc
gaactcaactggaccatcgcgctgatcaacgcgatccgttccgcccgcgcgcagatgcat
gtccccgccggtgcctatgtgccgctggtcgtggttgggtttgaaaccccggcgcgcgcc
gcatttgacgccaatgaagcgatgatcaagcgcttggcccgcgtcgagacgatgatggaa
gtcgagacgtttcccaagggttgcgccgcattgggcgtcaccggtggcagctttggccta
ccgcttgcggatatcattgatgtggcggaagaaaaggcgcggttgcaaaagacgctcgac
aagctgggcaaggaattgggggggctcagaggccgtctgaagaaccccaaatttgcagcc
tccgccccggaagacgttgtcgcggaaacccgcaaaaatctcgccctgcgcgaagcagaa
gaaggcaagctcagggaagccctcgcgcggttggccgaattggggtaa
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